Gene DehaBAV1_0985 details

Gene Information

• Locus tag: DehaBAV1_0985
• ID: 5132142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 976763
• End bp: 978673
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640529909
• Product: ABC transporter, transmembrane region
• Protein accession: YP_001214443
• Protein GI: 147669625
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAGA ACAGAAATAA CCCCCAATCC CGGATGCCGG TGAGCGGCGG CCCTATGGGT 
GGCGGCATGC ACATGGGTGG CGGCCCAATG GGCGGAATGC GTATGGCACA CTCAGGTGAA 
AAGGCCAGAA ATTTTAAGGA CACCATGACC AGCCTTTTAA AATACCTGAC ACCCTATCGC 
TTTACGCTTA TCATTGCACT GGTATTAGCC ATTTTCGGTA CGGTCTTTAC CATCATCGGC 
CCGAAGCTTC TGGGTAATGC AACCACCAAA CTTTTTGAAG GTCTGGTAAG TAAAGTCATG 
AACGCTCCGG GGGCCGGAAT TGACTTTACT TATATAGGTA ATATAGTACT GATTCTGGTC 
GGGCTGTATG CAGTCAGTGC CATATGCAGC TATATTATGG GTTATATAAT GACCGGCGTA 
TCCATCAAGG TTACTTATGA CCTTCGCAAA CAGATAGCAG AAAAAATAAA CCGCCTGCCA 
ATGAAATTCT TTGACAACAA GACCTATGGC GAAGTTTTAA GCCATGTTAC CAACGATGTT 
GATTTAATAT CCAATACCCT AACCCAAAGC ATGTCCCAGA TGGTTACCTC TGTAGTTACC 
ATACTGGGTG TGCTGGTGAT GATGTTCACT ATCAACTGGA TTATGGCACT TGCTTCGCTG 
ATAATAGTCC CCGTTTCTAT AGGCCTGATT TCCCTGATAG TCGGCCGGTC ACAAAAATAT 
TTCCGCAAAC AGCAGGACTA TCTGGGACAT ATAAACGGCC ACGTTGAAGA AATGTATTCC 
GCCCACAATG TTATGAAAGC TTTCAACGGC GAGGAAAAAT CCATAACCAA ATTTGAAGGG 
TTGAACGAAG AGCTGTACGG CGCATCATGG AAATCCCAGT TCCTCTCCAG CATTATGATG 
CCCATGATGA ACTTCATAGG CAACCTGAGC TATGTGGTTG TATGTATTCT GGGCGGCTTT 
CTGGCCATAC AGAAAACCAT TCAGGTAGGC GACATACTGG CTTTCGTCCA GTATGTCAGG 
TCATTCACTC AGCCGCTGGC CCAAACCGCT AACATTGTAA ATATACTCCA GTCTACCGCT 
GCGGCAGCCG AGCGTATTTT TGAATTTCTG GGAGAAGGCG AAGAAGTCCC CGAACCGGCT 
AATCCTGTCA GCCTGAAGGA TATTTCAGGT GCTGTCAGCT TTAAAGATGT GTCTTTTGGT 
TATAGCCCGA CCAAAGTTAT AATCAAAAAT TTCAACGCAG ACATAAAGCC CGGCCAGCGG 
GTAGCCATTG TCGGCCCTAC GGGTGCCGGA AAAACCACTA TGGTTAAGCT ACTGATGCGC 
TTTTATGACG TAAACAGCGG GGCTATTCTG GTAGACGGGA TAAATATACA GGATATCAAG 
AGACAGGAGT ACCGCAGTGC CTTCGGTATG GTACTTCAGG ATACCTGGCT GTTTAACGGC 
AGCATTATGG ATAATATCCG CTTTGGCAAG CTGGATGCAA CCGATGATGA GGTTTACACA 
GCGGCTAAGA CGGCCTACGT AGACCATTTT ATACATACCC TGCCAAATGG TTATGAAATG 
GTAATGAACG AGGAATCCAG CAACATCTCA CAGGGTCAAA AACAGTTGCT GACCATTGCC 
AGAGCCGTTT TGGCCAACCC AAAGATTTTG ATTTTAGACG AGGCTACAAG CTCGGTGGAT 
ACCAGAACCG AAATGCTGAT ACAGCAGGCT ATGGAAAACC TGATGAAAGG CCGCACGGCA 
TTTATAATTG CCCACCGTTT ATCCACCATC CGTAATGCAG ATATCATACT GGTGATGAAA 
GACGGAGCGA TTGTAGAACA GGGCAACCAT AAAGAACTGC TGGAGGCTAA CGGTTTTTAC 
GCTTCGCTAT ATAACAGCCA ATTTGAATCA GGACTGATAG AAAATAACTA A 

 

Protein sequence

MSQNRNNPQS RMPVSGGPMG GGMHMGGGPM GGMRMAHSGE KARNFKDTMT SLLKYLTPYR 
FTLIIALVLA IFGTVFTIIG PKLLGNATTK LFEGLVSKVM NAPGAGIDFT YIGNIVLILV 
GLYAVSAICS YIMGYIMTGV SIKVTYDLRK QIAEKINRLP MKFFDNKTYG EVLSHVTNDV 
DLISNTLTQS MSQMVTSVVT ILGVLVMMFT INWIMALASL IIVPVSIGLI SLIVGRSQKY 
FRKQQDYLGH INGHVEEMYS AHNVMKAFNG EEKSITKFEG LNEELYGASW KSQFLSSIMM 
PMMNFIGNLS YVVVCILGGF LAIQKTIQVG DILAFVQYVR SFTQPLAQTA NIVNILQSTA 
AAAERIFEFL GEGEEVPEPA NPVSLKDISG AVSFKDVSFG YSPTKVIIKN FNADIKPGQR 
VAIVGPTGAG KTTMVKLLMR FYDVNSGAIL VDGINIQDIK RQEYRSAFGM VLQDTWLFNG 
SIMDNIRFGK LDATDDEVYT AAKTAYVDHF IHTLPNGYEM VMNEESSNIS QGQKQLLTIA 
RAVLANPKIL ILDEATSSVD TRTEMLIQQA MENLMKGRTA FIIAHRLSTI RNADIILVMK 
DGAIVEQGNH KELLEANGFY ASLYNSQFES GLIENN