Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0964 |
Symbol | |
ID | 5131687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 952520 |
End bp | 953482 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529888 |
Product | cysteine synthase |
Protein accession | YP_001214422 |
Protein GI | 147669604 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00274794 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA GAACATCTAA ATATAATATC CATAATGGAC GCGGCATTGC GTCAAACATT ACAGAACTTA TAGGCAATAC TCCGCTGGTA CGTTTAAATA AGATAGGCAG CGGGCTAAAG GCCGAAATTA TACTCAAACT GGAATCGTTT AACCCCACCC ACAGTGCCAA AGACCGTCCG GCTCTGTATA TGATAAAAAA GGCCGAGCAG GAAGGCAAGC TTATACCCGG CAGTATCGTA ATAGAGTCAA CCAGCGGCAA TACCGGCATA GCTCTGGCTG CCGTTTGCGC TGCCAAAGGT TACCGGTTGA TGCTCACCAT GCCTGAAAAC TTTTCGGTGG AACGCAGGCG TTTACTCCGT CTGCTGGGAG CAGAGCTGGT GCTCACCCCG GCAGAACTGG GCATGCAGGG GGCTATAGAA AAGGCGGCCG AACTTAAGGC TAAACTGCCC CAAGCCTTTA TACCGAACCA GTTTGAAAAT CCAGCTAATC CTGAAAGCCA TTATAAAACT ACTGCCGAAG AAATCTGGCG GGATACAGAC GGCAAAGTGG ATATACTGGT GGCAGGCGTA GGCACCGGCG GTACCATAAG TGGTATCGCC AGAGGGCTAA AGGCAGCCAA ACCATCTATA CGGATAATAG CGGTAGAGCC GGCTGAGTCA CCCGTAATTT CTGGTGGCGA ACCTCAGCCT CACCTTATTC AAGGCATAGG GGCAGGCTTT ATACCCCGCA TACTCTCTCT GGAACTGATA GATAAAGTTA TCAGGGTACC CGGAAAAGAA GCCGTCAACA TGGCTCTCCG GTTGGCACGC GAAGAAGGGA TTATGGCTGG TATTTCTTCC GGAGCGGCAC TTTGGGCGGC ACTGGAAACA GCCAAACAAG CAGAAAACTC AGGCAAGCTT ATCGTCGCCA TCATGCCGGA CAGCGGCGAA CGGTATCTGT CCAGCCTGCC TCTGGGTGAC TAG
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Protein sequence | MENRTSKYNI HNGRGIASNI TELIGNTPLV RLNKIGSGLK AEIILKLESF NPTHSAKDRP ALYMIKKAEQ EGKLIPGSIV IESTSGNTGI ALAAVCAAKG YRLMLTMPEN FSVERRRLLR LLGAELVLTP AELGMQGAIE KAAELKAKLP QAFIPNQFEN PANPESHYKT TAEEIWRDTD GKVDILVAGV GTGGTISGIA RGLKAAKPSI RIIAVEPAES PVISGGEPQP HLIQGIGAGF IPRILSLELI DKVIRVPGKE AVNMALRLAR EEGIMAGISS GAALWAALET AKQAENSGKL IVAIMPDSGE RYLSSLPLGD
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