Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0937 |
Symbol | |
ID | 5131660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 922326 |
End bp | 923009 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529861 |
Product | two component transcriptional regulator |
Protein accession | YP_001214395 |
Protein GI | 147669577 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.834094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAGA AAATACTGAT AGCTGATGAT GAAAAAAGGA TAGCGGAAAT CCTGCAAGCC TATTTGGAAC GTGAAGGCTT CAGGGTGATA GCTACTTATG ACGGCAAGAC AGCCTTAGCC AAATTTCACG AAGAAAACCC TGACCTGATA ATACTTGACC TGATGCTGCC TGAAATATCC GGCTGGGATG TCTGCCGCGA AATCCGCAAG GAAAGCCGTG TACCTATAAT AATGCTTACC GCCCGTGACG AACTCACCGA CAAGCTTATA GGACTGGAAA TTGGGGCGGA TGATTATATG ACCAAGCCCT TTGAATCCAA GGAACTGGTA GCCCGCGTCA AAGTCCAGCT CAGACGGTCT GAATACCCCC CCAGCCCTGA TTCAGCACTG GTTATTGACC AACTGGAGAT AGATCAGGAA CGGCGTCTGG TCAAGATTGA TGGCAAAACT GTAGACCTGA CCGCCACCGA ATTTGATATA TTGATAAGCT TGGCCGTAAG TCCGGGTCGG GTTTTTTCCC GTATGCAGAT ATTGGACAAG CTGGGCGAAG CTTACGAAGG ATATGAACGC ACCATAGACA GCCATATTAA AAATCTACGA AAAAAAATAG AGCCTAACCT CGAATCCCCT ACCTATATCC TGACCGTACA CGGGGTGGGC TACAAGATGA AAGACAGAGG ATAA
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Protein sequence | MPKKILIADD EKRIAEILQA YLEREGFRVI ATYDGKTALA KFHEENPDLI ILDLMLPEIS GWDVCREIRK ESRVPIIMLT ARDELTDKLI GLEIGADDYM TKPFESKELV ARVKVQLRRS EYPPSPDSAL VIDQLEIDQE RRLVKIDGKT VDLTATEFDI LISLAVSPGR VFSRMQILDK LGEAYEGYER TIDSHIKNLR KKIEPNLESP TYILTVHGVG YKMKDRG
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