| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0853 |
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| Symbol | |
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| ID | 5131454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 841740 |
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| End bp | 842990 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640529771 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001214313 |
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| Protein GI | 147669495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.230835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATA TAGCTTTAGA TACGCTGGGG TGTAAACTTA ATCAGGCCGA AACAGAGGCT
ATGGGGCGTG AATTCGCACA GGCGGGTTAC CATTTGGTAA GCCCGCAGGA TAATTGGGAT
ATTTATATCT TGAATACCTG TACAGTCACC CATGTGGCAG ACCGAAAGGC CCGCTATCAG
ATGCGGATTG CCCGCCGTCA CAATCCAAGC GGCTTTATTT GCCTGACAGG CTGTTATGCT
GAAAATGGGG GAAATGAAAT AAGTTGCCCT GATGCTAATC TGATACTGGA TAACCGGCAG
AAAACGGATA TTGTTAATAA TATTATCAGG CTTTTCCCTC TTGAAAACAG CGCTTCGGCT
TTATATGAAA AAGGCAGAAC CCGCAGTTTT ATAAAGATAC AGGACGGGTG TGATAACTTT
TGTACATACT GCATAGTACC TTTTGTAAGG CGGTATAAAA ACTGCCGCGG GGTGGATGAC
ATAATCAGCG AAATAAACTT GAGACAGGCT GAAGGGTATC AGGAAATTGT GCTTACCGGC
ACGGAAATAG GTGAGTATAC ATCCAGCGGG TTTAATCTGG CAGGGCTGAT TGAAGCTATA
CTGGAACGTA CCAGAATACC TCGCCTGCGG TTGTCTTCTC TTCAGCCAAA CGAAATAACC
CTTCCGCTTT TAGCTCTCTG GAAAAACCGG AGATTGTGTA ACCATTTTCA TATGGCTCTG
CAAAGCGGCA GTGACCGCAT CCTGGGTTTA ATGAATCGCC CTTACAGTCT GACGGACTAT
ACCCGTACAT TGGAAGCTAT CCGCAGGCAG ATTCCGGATG TGGCTGTCAC TACCGATATG
ATAGTAGGTT TTCCTGGAGA AACCGATGAA GATTTTGCAT GTAGCTTGAA ATATGTGGAG
CAGGCAGGTT TTGCACGGGT GCATCCTTTC CCGTATTCCG AGCGTCCGGG TACAATGGCA
TCACAGCTGA CGGATAAAGT AGACCCTGTG GTAATAAAAA CACGTCTGTC TGGGATGATG
CTTGCGGCCA AAAATGCCAG TTTGGAGTAT CGTCACCAGA GCAGGGATTT GGAAAAGGAA
GTACTCTGGG AGAACAAAAT GAAAGATGGT CTTTGGTTTG GCTATACCCC TGACTATATA
CGGGTATATG GCAAATTTAC AGAAAAGCCG ACTAATACTA TTTCGCGAGT GAAGCTGGCT
AAAGTATATG CTGACGGGGT ACTATCCAGT GAAATAGCTT CACAGGTTTA G
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| Protein sequence | MFNIALDTLG CKLNQAETEA MGREFAQAGY HLVSPQDNWD IYILNTCTVT HVADRKARYQ
MRIARRHNPS GFICLTGCYA ENGGNEISCP DANLILDNRQ KTDIVNNIIR LFPLENSASA
LYEKGRTRSF IKIQDGCDNF CTYCIVPFVR RYKNCRGVDD IISEINLRQA EGYQEIVLTG
TEIGEYTSSG FNLAGLIEAI LERTRIPRLR LSSLQPNEIT LPLLALWKNR RLCNHFHMAL
QSGSDRILGL MNRPYSLTDY TRTLEAIRRQ IPDVAVTTDM IVGFPGETDE DFACSLKYVE
QAGFARVHPF PYSERPGTMA SQLTDKVDPV VIKTRLSGMM LAAKNASLEY RHQSRDLEKE
VLWENKMKDG LWFGYTPDYI RVYGKFTEKP TNTISRVKLA KVYADGVLSS EIASQV
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