Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0830 |
Symbol | |
ID | 5131352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 816795 |
End bp | 818687 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640529747 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001214291 |
Protein GI | 147669473 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAG TAGACACGAT ACCCAAACTG GTAAAACATA ACGCCGAGCA ATGGGGCGAT AAGCCTGCCA TGTGTATGAA AAATCTGGGT ATATGGCAAA AATATACCTG GAGTGATTAT TATCAAACCG TAAAATATTT CGGTTTGGGT TTGCTTAGCC TGGGTACCAA ACCTTCCGAC CGGGTGGCTA TTATAGGCGA TAATGAACCC GAATGGTTTT GGGCGGAATT TGCCGCCCAG TCTATTGGTG CAATTCCTAC CGGTATATAC GTTGATTCCA TACCTGACGA GGTTAAATAT ATTGCCAGCC ATGCTGAAGT AAGAGTGGCA GTGGTAAATG ACCAAGAACA GGCAGACAAA TTTCTTGAGC TGCTGCCCGA ACTGCCAAAC TTAATTAAGA TTATTTACTG GGATCCCAAA GGGCTTAAAA ACTACGATGA CCCCATGCTT GTAAGCTTTA AAGAAGTAAT AAAGCTGGGC AGGGAATACG AAAAAGCCAA CCTAGATTTA TTTGAGCGAC TGCTAGATAC TACCAAACCA GATGATATAG CCTTTATTTA TTACACTTCA GGTACTACCG GCCTGCAAAA AGGGGCTATG CTCAGCCACC GTTCCCTTAT TACTACTGCA AAGGGTTTTG TTGCCCGTTA CCCGCTGAGT TATAAAGACG ATCTTATTTC CAATTTCCCT GCCTCATGGG TGGGGGACAG TTTTTTTGCC ACTATACCCC ACATTCTCTC CGGGGCACGC CTGAATTTTC CTGAAGAACC GGAAACGGTA GCCGAAGATA CCCGTGAGAT TGGGCCTAAC TTCGTCATAT ACGGCCCGCG TCAATGGGAG AGTCTGGTAA GTGAGATACA GGTAAAAATA ATGGACGCCC ACCCCTTGAA ACGTTTGGCT TATAAAGTGC TTTCACCCGT GGGATATAAA ATGGCCGAAA AAACTCTCAC CGGAGGCAAG CCCGGTTTGC CTCTCATGGT AGGCCATAAA ATAGCAGACG CTCTGCTGTT TCATCCATTG AAAGATAAAC TAGGAGTCAG CAAGGTAAGA TTCGGGGTTA CCGGAAGCTC GGTGCTTTCG CTGGATACTT TTAAAATGAT ACATTCCATG GGTATTGAGC TAAGGCAGAA TTATGCTTCA ACTGAAGCCG GGTTTATTTC TTCCCATGGG AAGGGTGATA TAAGCTTTGA AAGTGTGGGA CGGCCGGCGC TTGGTACTGA GGTACGCCTG ACAGATGAAG GTGAACTCCT TATCCGCAGT GACTGTATGT TCAGCGGCTA TTACAAAGAT CCTGAGAGAA CTGCCCAAAG TTTTCGGGAT GGCTGGTTTG CTACCGGTGA TGCTGTAAAT ATAAACGAAA AGGGTCACCT GATATTCCTT GACCGCCTTA AGGACTTGGG GGTGCTGGCA AACGGGATTA AATATGCCCC TCAGTATATT GAAGGACGCT TGCGTTTCAG CCCTTATATA AAAGATGCCA TGGTAGTTGG CGGTGAAGAC AAGGAATATG TAACCGCTAT TATAAATATT GATTTCACTA TGGTAAGCAA ATGGGCACAG AAAAACCGTT TGAATTTCAC TACCTTTGTA GATCTTTCCC AGAAAAATGA AATAGCTGAT TTAGTGGCCA AAGACCTTAT GCGGGTAAAC AGTTATTTGC CGGAAGGCTC TAGGGTAAGG AAATTTGTTT TGCTGCATAA AGAGTTTGAC CCCGATGAAG CTGAACTTAC CCGTACCCGA AAACTTCGGC GGGGATTTGT ATCCGAAAGA TATAAAGACC TGATAGATGC CATGTACCAT CTGAATAAGG AAGTAAAGGT GGAAGCGGCG GTAACCTATC GGGACGGACG CAAGGGTGTG GTAACTACCA GTATAAAAGT AAGGTCTTTG TAG
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Protein sequence | MAEVDTIPKL VKHNAEQWGD KPAMCMKNLG IWQKYTWSDY YQTVKYFGLG LLSLGTKPSD RVAIIGDNEP EWFWAEFAAQ SIGAIPTGIY VDSIPDEVKY IASHAEVRVA VVNDQEQADK FLELLPELPN LIKIIYWDPK GLKNYDDPML VSFKEVIKLG REYEKANLDL FERLLDTTKP DDIAFIYYTS GTTGLQKGAM LSHRSLITTA KGFVARYPLS YKDDLISNFP ASWVGDSFFA TIPHILSGAR LNFPEEPETV AEDTREIGPN FVIYGPRQWE SLVSEIQVKI MDAHPLKRLA YKVLSPVGYK MAEKTLTGGK PGLPLMVGHK IADALLFHPL KDKLGVSKVR FGVTGSSVLS LDTFKMIHSM GIELRQNYAS TEAGFISSHG KGDISFESVG RPALGTEVRL TDEGELLIRS DCMFSGYYKD PERTAQSFRD GWFATGDAVN INEKGHLIFL DRLKDLGVLA NGIKYAPQYI EGRLRFSPYI KDAMVVGGED KEYVTAIINI DFTMVSKWAQ KNRLNFTTFV DLSQKNEIAD LVAKDLMRVN SYLPEGSRVR KFVLLHKEFD PDEAELTRTR KLRRGFVSER YKDLIDAMYH LNKEVKVEAA VTYRDGRKGV VTTSIKVRSL
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