Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0782 |
Symbol | |
ID | 5131637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 770581 |
End bp | 772503 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529698 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001214243 |
Protein GI | 147669425 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG3411] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGGC TAAATACTCC GGCTAAGCTG GAAATACTGC GTGAAAAACT GGCAAAAAAA CAGTCTGCTA GCCGTCCCTG CATAACGGTA TGTTGCGGTA CGGGTTGCCG GGCTTTGGGT TCAGTTAAAC TGGTAGATGC CTTCCGAAGT GAACTTGCCA AACAAGGGCT GGAGAATCAG GTTGATATCA AAGAAACCGG CTGTCACGGC TTTTGCGAAA AAGGTTCGGT AGTCGTTATA TATCCCCAAA ATATCTGCTA TTTCCATGTC AAACCTGAAG ATGCAGCTGA CGTTATCGAA AAAACTATTA AAACCGGTGA ATTAGTGGAA CGCTTACTGT ATGCAGATCC TGCCACCGGA GAGAAACTGG TCTACCACCA TGACATCCCC TTTTATAAAT ATCAGAAGCG TATTGTACTG GGTGATAACG AACATATAAA CCCCCAAAAT ATAGAGGATT ATATCCAGCG TGGTGGTTAT TCCGCTCTGG TTAAAACCCT TTTCCATATG ACTCCTGAAT CTGTGCTGGA AGAGGTAGAC AAAGCCAATT TGCGGGGACG CGGCGGCGGA GGTTTCCCGG CCGGTAAAAA ATGGCGCACT ACCCGTGATG CCGCAGACCC GGTCAAGTAT GTACTGGTAA ACTGTGACGA AGGTGATCCG GGTGCTTTCA TGGACCGTTC CATAATGGAG GGCAATCCTC ATTGTGTACT GGAAGGTCTG GCTATCGGGG CTTTTGCCAT TGGTGCTAAA GAAGGTTATA TATATGTTAG GGCTGAATAC CCTTTAGCGG TAGAAAATCT GTATGCTGCT TTAAGGCAGG CTGAAGAATA TGGCTTGCTG GGCAAAAATA TACTCGGCTC AGGTTTTGAT TTTGTAGTCA AAGTCCATGA GGGCGCCGGC GCTTTTGTAT CCGGTGAATC ATCCGCTTTA ATGACTGCTA TCGAAGGCCG GGTTGGTGAA CCCCGCCCCA AATATATCCG CACCGCTATC AAAGGCCTCT GGGATAAACC TTCAAACCTG AATAACGTGG AAACTTGGGC TAACGTACCC CACATAATAA ATAAAGGGGC AGACTGGTTC AGGTCTATCG GCACAGAGGG CAGCAAAGGC ACCAAGATAT TCGCACTGGT TGGCAAGGTC AATAATACCG GACTGGTGGA AGTGCCTATG GGGACTACTC TTCGGGACAT TATATTTAAA ATAGGCGGCG GTTTGCGTGA CGGCAAAAAA ATAAAAGCTG TCCAGACAGG CGGGCCTTCA GGCGGATGTA TACCGGAAAA TCTGCTGGAT TCGCCTGTTG ATTATGATGC ACTAAGCAAG CTGGGTTCTA TGGTAGGCTC AGGCGGGCTG ATAATAATGG ACGAAGAAAC CTGCATGGTA GACATCGCCC GTTATTTTAT AAACTTTTTA TCAGACGAAT CTTGCGGCAA GTGCTTACCC TGCCGTGAGG GTCTGCGCCA GCTGGTAGAT ATACTTACCC GTATTACCGA AGGCAAAGGC ACTATGGTTG ACATGGATAC ACTGGAAGAC CTGAGCGGCG TAATGAGTGA AGCCTGTTTG TGTGCCCTGG GACAACAAGC CCCCAACCCC TTGCTCACTA CTCTTAAATA TTTCCGCCAC GAATATATTG ACCATATTAA AAATAAGCAT TGCGAAGCCG GTGTTTGTAA AGCCTTGCTT ACTTTTTATA TTGACCCTGA CAAATGCAAA GCCTGTATGA TTTGTGCCAG AAACTGCCCC ACTGACGCCA TCAAGGGCGG CAAGGGGCTT ATTCATACGA TTGAGCAGGG AAAATGCATC AAATGCGGTG CTTGTGTAGA TACCTGCCCT GCCAAATTTG ATGCCGTTAT TAAAATATCC GGCAAACCTA TTCCAAAAAA TGTACCGGCT GAACCTATTC CTTTAAACCG GAAGGCAGAA TAA
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Protein sequence | MPRLNTPAKL EILREKLAKK QSASRPCITV CCGTGCRALG SVKLVDAFRS ELAKQGLENQ VDIKETGCHG FCEKGSVVVI YPQNICYFHV KPEDAADVIE KTIKTGELVE RLLYADPATG EKLVYHHDIP FYKYQKRIVL GDNEHINPQN IEDYIQRGGY SALVKTLFHM TPESVLEEVD KANLRGRGGG GFPAGKKWRT TRDAADPVKY VLVNCDEGDP GAFMDRSIME GNPHCVLEGL AIGAFAIGAK EGYIYVRAEY PLAVENLYAA LRQAEEYGLL GKNILGSGFD FVVKVHEGAG AFVSGESSAL MTAIEGRVGE PRPKYIRTAI KGLWDKPSNL NNVETWANVP HIINKGADWF RSIGTEGSKG TKIFALVGKV NNTGLVEVPM GTTLRDIIFK IGGGLRDGKK IKAVQTGGPS GGCIPENLLD SPVDYDALSK LGSMVGSGGL IIMDEETCMV DIARYFINFL SDESCGKCLP CREGLRQLVD ILTRITEGKG TMVDMDTLED LSGVMSEACL CALGQQAPNP LLTTLKYFRH EYIDHIKNKH CEAGVCKALL TFYIDPDKCK ACMICARNCP TDAIKGGKGL IHTIEQGKCI KCGACVDTCP AKFDAVIKIS GKPIPKNVPA EPIPLNRKAE
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