| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0776 |
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| Symbol | |
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| ID | 5131283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 763672 |
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| End bp | 764808 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640529692 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001214237 |
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| Protein GI | 147669419 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00749552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA ACAGCCTTGC TTTGTATATG CATTTCCCTT TTTGCCTGAA AAAATGCGGA
TACTGCTCGT TTATTTCTTA TCCGGACAAA CTGGAGAGTG TGCCGGATTA TGTAAACTGC
CTTAAGAAAG AAATTAAACT ACGGACAGAG GGGCTTTGCT TGCACAGCCT TTATTTTGGC
GGAGGAACGC CCAGCCTTTT ATCACCTTCG CAGGTGGCAG ATATCATGAG TAGTATACAA
ACAGTATCGC ATCTTTTGCC CGGTGCAGAG ATTACATTTG AAGCTAATCC GGGTACTCTT
AGCCTGCCCT ATCTTAAACA GTTAAGCGGG CTCGGCATCA ACCGTTTGAG CTTGGGTATC
CAAAGTTTTT CAGATGCAGA GCTGACAATG CTGGGCCGTT TGCATGACGC TCAACAAGCA
CGGCATATAT ACACACAAGC CAGAATCTCC GGTTTTGACA ATATAAATCT TGATCTTATT
TATGGTTTAC CCCATTCCAC CCTGCTTTCT TTTAAAGCCA ATCTGAGTGA AATGCTGAAA
CTTGAGCCGG AACATATTTC ACTTTACGGT CTCACTCTGG AGGAAGACAC CCCCATGTAT
CTTCAGGTGC AAAAAGGATT ATTGCCCTTT ATGGATTCCG AAATTGCGGC TGACCAGTAT
CAGCTGGCTG AAGAAATGCT GGAGAGTGCC GGCTACCATC ACTATGAGAT TTCCAACTGG
GCTAAACAGG GCTATGAGAG CCGTCATAAC CTTACTTACT GGCAAAACAG GCCTTATCTG
GGTTTGGGTG TGGCTGGGCA TTCCTTTTTT CAGAATTGGC GTACAGCTAA TACCATAGAC
CTTGATGAAT ATTTACTTTG CTGGCAAAAT AATTCCCCGC CGTCACCGTC TGAAAATATA
AATGTAGATT TAGCTAATCA GCTGGCTGAA ACTATAATAT TGGGGCTTAG GCTGGATAAG
GGTGTAACCG CTGAAGATAT TGAAGCCCGT TTCGGGACGT GTGTGATGGA TATGTATTAT
CCCCAGATTC AAGAATGTGT TGAATTGGGG CTTTTGGAAG AGCATGATGG CTGTATCCGC
CTGACCCCCA GAGGCAGGTT GCTCTCTAAC GAGGTATTCT GGCGTTTCTT GCCTTAA
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| Protein sequence | MTQNSLALYM HFPFCLKKCG YCSFISYPDK LESVPDYVNC LKKEIKLRTE GLCLHSLYFG
GGTPSLLSPS QVADIMSSIQ TVSHLLPGAE ITFEANPGTL SLPYLKQLSG LGINRLSLGI
QSFSDAELTM LGRLHDAQQA RHIYTQARIS GFDNINLDLI YGLPHSTLLS FKANLSEMLK
LEPEHISLYG LTLEEDTPMY LQVQKGLLPF MDSEIAADQY QLAEEMLESA GYHHYEISNW
AKQGYESRHN LTYWQNRPYL GLGVAGHSFF QNWRTANTID LDEYLLCWQN NSPPSPSENI
NVDLANQLAE TIILGLRLDK GVTAEDIEAR FGTCVMDMYY PQIQECVELG LLEEHDGCIR
LTPRGRLLSN EVFWRFLP
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