Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0745 |
Symbol | |
ID | 5131712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 733201 |
End bp | 734298 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529661 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_001214207 |
Protein GI | 147669389 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000247717 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATTTCA AACTGACAGT TCTGCCTGGT GACGGCATCG GTCCGGAGGT TATGGACGAA GGCTTAAAAG TTTTAAATGC CGTCGCCAAA AAATACAAGC ACACTTTTAA ATATCAGTAC GGACTTATCG GCGGTTGCTG TATAGACAAA GAGGGAGTAG CACTTAGTCC GGCAGCTCTG GCTATGTGCA AAAAATCCGA TGCCGTTTTA TTGGCGGCAG TGGGTGACCC CCGTTTTGAT GACCCTAAAC TGCCTGTCCA CCCTGAAGAC GGATTGCTGG CACTTAGAAA GGGGCTTGGC CTTTTTGCCA ATATCCGTCC GGTCAAGGTT GCCCCTTCAC TGGTAAATTC CACCCCCATA AAGGCCGAAA TAGTAAAAGG GACTGATTTT ATATTTATCA GGGAACTAAC CGGTGGCGTA TATTTTGCCA AGCCCAAAAA ACGCTGGACG ACACCTGCCG GTATCCGCAA AGCTACTGAC AGCATGACTT ACTCTGAAAA TGAGATTGAA CGGATTGTGC GGGTAGGGTT TGAGCTGGCT AAAAACCGCA AGAAAAAATT GGTTAGCGTA GACAAGGCCA ATGTCTTACT GTCTTCCCGC TTGTGGCGCC AGATAGTTAT AGAAGTGGCA AAAGATTACC CTGAGGTGAA GGTAGAACAT GTACTGGTAG ATGCCTGTGC CATGAAACTT ATACTTGCAC CTACCTATTT TGACGTTATT GTCACCGAAA ACTTGTTCGG TGATATTTTG ACAGACGAGG CCTCCATGCT GGCAGGTTCT ATGGGTATGC TGCCTTCTGC CTCTCTGGCA GGCATACCGG CAAAGGGCAC TAAAACTTTT GGTCTCTATG AACCTATTCA CGGCAGTGCC CCCACTATTG CCAAACAAAA TATTGCCAAC CCCATTGCCA CCATTTTAAG CATAGCCATG ATGCTACGCT ACTCTTGTGG ACTGGAGACT GAAGCTGTTG AAATTGAATC TGCGGTTGAC AAGGTTCTGG CAGCTGGTTA TGCTACGATA GATATATTCA AAGAGGGTAA TACCAAGCTC GGTACTGCCG AGATGGGTAA CCAGATAACT AAAATGATAG GAGGCTAA
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Protein sequence | MDFKLTVLPG DGIGPEVMDE GLKVLNAVAK KYKHTFKYQY GLIGGCCIDK EGVALSPAAL AMCKKSDAVL LAAVGDPRFD DPKLPVHPED GLLALRKGLG LFANIRPVKV APSLVNSTPI KAEIVKGTDF IFIRELTGGV YFAKPKKRWT TPAGIRKATD SMTYSENEIE RIVRVGFELA KNRKKKLVSV DKANVLLSSR LWRQIVIEVA KDYPEVKVEH VLVDACAMKL ILAPTYFDVI VTENLFGDIL TDEASMLAGS MGMLPSASLA GIPAKGTKTF GLYEPIHGSA PTIAKQNIAN PIATILSIAM MLRYSCGLET EAVEIESAVD KVLAAGYATI DIFKEGNTKL GTAEMGNQIT KMIGG
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