| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0731 |
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| Symbol | |
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| ID | 5132274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 720035 |
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| End bp | 721537 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640529646 |
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| Product | phytoene dehydrogenase and related protein-like protein |
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| Protein accession | YP_001214193 |
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| Protein GI | 147669375 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.444322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAA AAAAGGTTAT CATTATTGGT GCCGGTCTGG CCGGGCTTTC TGCTGGTTGT
TATTCCCGAA TGAATGGTTA TGCTACCCGT ATTTATGAGC ATCATTCCAA ACCGGGTGGT
GTTGCGGCTT GTTGGCGGCG GGGCGAATAC CTGATTGACG GAGGTATTCA CTTTATGATG
GGTTCCCAAA ACGGCACTGA TTTATATAAT ATCTATCGCC AGCTTGGGGT GGCAGATCCT
GCTAATTTTG TTCCTATGAA ATCATACGGC AGTTTTATTG ATATTGAGGG GAGCAGACAG
TTGGATATCC CGCTAAATAT TTCAGAACTG GCTTTAGACC TAAAAATGCT TTCCCCTGCA
GATGCCCCCC TGATAGAAGA CTTGGCTACG GCAGTTACTG CTTTTTCAGG CAAAGACTTA
GCTATTTACG GCCAAATGAA TCCGCCTGAA TTGACTTCCG GGTTAGATAA GCTTACGGAT
ATGTGGAAAA TGCGCAAGCT GTTTAAATAT ATGTCCGGCA AGTACGCAAA AAGTATGCAA
GACTATACTG CCGGCATGCA AAACCGCTGG CTGGCTGAAC GTTTGAATAA CCTCTTTACT
CCCCAATGCC CTGTCTGGTT TGTAATTATG TTGCTGGCCA TTGCTGCTGA CGGGCAAATG
AGCTATCTGG CAAAAGGCTG CAAAGATTTT GTCCGCCAGA TAGAAAAACG GTATAAAGAC
CTGAATGGAG AAGTAACCTA CAGTTCTACC GTGGAAAAAA TACTGGTCAG AGATGACTGT
GCTTTTGGCG TCAAGCTGGC TGACGGGACT GAGGACTATG CAGATTACGT AATTTCTGCC
GGTGATATTC ATAATACAGT TTTTCACCTG CTGGACGGCA AATATATAGG CAAAAAGCTT
CAAAATAAGT TTGATACCTG TGAACTCAGC CGCCCGTATT TTGTGGCTAG TTTTGGTGTA
AAACGGACTT TTGAAAATGA AAGCGTTTTT AATACTCTCA TTCTAAAACA GCCCCTGCAG
ATTGGAAACC GAGAGATTCG GCAAATATTT GTGCGTATAT TTAACTACAG CAACCATTTT
GCACCTAAAG ATAAAAGTGT GATTCAGGCG GAGTTTGAAA CCGAATGGGA TTACTGGGAT
AACCTTCGGC AAAAAGATCC TAATAAATAC GCCGCTGAAA AAGAACGGCT GGTATCTGAA
ATACTGGCTA ATCTGGAGAT ACTCTATCCC GGGATATCCC CACTGGTAGA GATTGCTGAT
GTAGCTACTC CCTGCACTCT TAACCGTTAT ACGCTAAACC ATCAGGGTGC GCCTGAAGGC
TGGGGGCTTA CCAGCCAAAA CTTCAAGGAA GAAACAAGGC GGAGTCTAGA GGGGCTATCA
AACCTTTATC TGGCAGGGCA TTGGGTATCC GGGGGTGTGC CGGGAGTAAT TCTTTCCGGG
CGTCAGGCTA TACAGTTGGT ATGTGCCAAA GAAAAGAAGC CCTTTTTTAC CAGAACTACT
TAG
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| Protein sequence | MSSKKVIIIG AGLAGLSAGC YSRMNGYATR IYEHHSKPGG VAACWRRGEY LIDGGIHFMM
GSQNGTDLYN IYRQLGVADP ANFVPMKSYG SFIDIEGSRQ LDIPLNISEL ALDLKMLSPA
DAPLIEDLAT AVTAFSGKDL AIYGQMNPPE LTSGLDKLTD MWKMRKLFKY MSGKYAKSMQ
DYTAGMQNRW LAERLNNLFT PQCPVWFVIM LLAIAADGQM SYLAKGCKDF VRQIEKRYKD
LNGEVTYSST VEKILVRDDC AFGVKLADGT EDYADYVISA GDIHNTVFHL LDGKYIGKKL
QNKFDTCELS RPYFVASFGV KRTFENESVF NTLILKQPLQ IGNREIRQIF VRIFNYSNHF
APKDKSVIQA EFETEWDYWD NLRQKDPNKY AAEKERLVSE ILANLEILYP GISPLVEIAD
VATPCTLNRY TLNHQGAPEG WGLTSQNFKE ETRRSLEGLS NLYLAGHWVS GGVPGVILSG
RQAIQLVCAK EKKPFFTRTT
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