Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0727 |
Symbol | panB |
ID | 5131353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 716154 |
End bp | 716993 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640529638 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001214189 |
Protein GI | 147669371 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0306792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACCA CTATCAGCCA ACTTAAAGAA ATGAAACAAA ACAAACAGAA GATAGCCATT TTGACTGCTT ATGACTATCC CACTGCCCAA ATACTGGATA AAGCCGGTAT CCCGGCCATA CTGGTAGGAG ACAGTCTGGG TATGGTAGTG CTGGGGTATG ATTCTACCGT AAGCGTTACT ATGGAAGATA TGCTGCACCA TCTGAAAGCC GTAGTCAGGG GCAGTCAAAA AGCCCTGATT ATAGCAGATA TGCCATTTAT GACCTACCAT CTGAGTCCGG AACAGGCGCT GTTAAATGCC GGTCGTTTTA TTCAGGAGGG CGGTGCTCAG GCAGTCAAGC TGGAGGGTGG AGTAAATGTG GCTGACAAGG TTAAAAGAAT AGTAGACTGC GGTATACCTG TTATGGGGCA TATCGGACTT ACCCCCCAAT CTGTAAACCA GTTAAGCGGA TTTAAGGTGC AGGGGAAAAC TCTGGCAACT GCCCTATCCC TTATAGAAGA TGCCAAGGCT CTGGAAAAAG CCGGGGCCTT TGCAATAGTG CTGGAGACTA TGCCGGCTGA ACTGGCGGCT ATTATTACAG CCGGTATTTC CATACCTACC ATAGGTATAG GTGCCGGAGA AGAATGTGAC GGGCAGGTAC AGGTGATATC AGATATGCTG GGTATGTTTA CTGATTTTAT ACCCAAGCAC ACCAAACGGT ATGCTGATTT AAATGGCATT ATTACAAAAG CTGTATCTGA ATATGCCGCT GAAGTCACTA AAGGTGCGTT TCCCACTTTA AAGGAGAGCT TCACCCTTGA TAAAAAGGTA CTGGAGGAAC TGAAAAAGTG CGTATTATAA
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Protein sequence | MRTTISQLKE MKQNKQKIAI LTAYDYPTAQ ILDKAGIPAI LVGDSLGMVV LGYDSTVSVT MEDMLHHLKA VVRGSQKALI IADMPFMTYH LSPEQALLNA GRFIQEGGAQ AVKLEGGVNV ADKVKRIVDC GIPVMGHIGL TPQSVNQLSG FKVQGKTLAT ALSLIEDAKA LEKAGAFAIV LETMPAELAA IITAGISIPT IGIGAGEECD GQVQVISDML GMFTDFIPKH TKRYADLNGI ITKAVSEYAA EVTKGAFPTL KESFTLDKKV LEELKKCVL
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