| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0715 |
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| Symbol | |
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| ID | 5131719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 705203 |
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| End bp | 705952 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529626 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_001214177 |
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| Protein GI | 147669359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTACA ATTCTTCTTC AGATACCTCA CTGGTCAAAG TTCTGGTGGA AGCCAGGCTT
GGCTCACGCC GCAAAATGGC CGAGGCTATA AAACAAGGGT TGGTTACCCT GAACGGGCAA
AAAGCGGAAT CTTATTCCCA GCCGGTAAAT ACCCAAAAGG ATAAGGTAAC CTTTGAGGGC
AAACTTGTTG TACTTAGCCG CGTACGCCGC ATTTACCTTA TGTTAAATAA GCCCCCCGAA
ATAGTATCAA CCACCAGTGA TGAATTGGGC CGTAAAACAG TGATGGATTT GCTCCACCGC
CGTTATGAAG GGGCTGGTCT CTTCCCTGTG GGCAGGCTGG ACGAAGCCAC TACCGGTCTT
ATATTGCTGA CCAACGACGG TGAAATGACT AACCGCCTTA CTCACCCCAG TTATGAAATA
GAAAAAGAAT ACCTTATATC TATTGATGCT GCTCTGACTC AGGCAGATAA AGAAAGTCTG
GAAAAGGGTA TCCTGCTGGA TGACGGGCTT ACCTCGCCTG CCCGCTTGAG CAGGGTTACG
GATGAACCAC CGTATAACTA CAAGCTGATA ATCCATGAAG GTAAAAAAAG GATAGTCCGC
CGCATGTTTG CCCGTTTGGG GCATCCGATA AAAGCTTTGA AGCGAAGCCG TATAGCTACA
CTGCGTTTAG GTAAACTGGA AGAAGGTAAA ACCCGTGAGC TTACTCCGGG AGAGATAGCC
GCTCTCAGGC GTATTACCCG CCTTAAATAA
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| Protein sequence | MAYNSSSDTS LVKVLVEARL GSRRKMAEAI KQGLVTLNGQ KAESYSQPVN TQKDKVTFEG
KLVVLSRVRR IYLMLNKPPE IVSTTSDELG RKTVMDLLHR RYEGAGLFPV GRLDEATTGL
ILLTNDGEMT NRLTHPSYEI EKEYLISIDA ALTQADKESL EKGILLDDGL TSPARLSRVT
DEPPYNYKLI IHEGKKRIVR RMFARLGHPI KALKRSRIAT LRLGKLEEGK TRELTPGEIA
ALRRITRLK
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