Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0706 |
Symbol | rnhB |
ID | 5131298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 696521 |
End bp | 697159 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640529617 |
Product | ribonuclease HII |
Protein accession | YP_001214168 |
Protein GI | 147669350 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCAA CTGTTATTTG CCCCAGCCGG GCTGAAGAAA AACTGCTTCG TAAACAGGGT TTTATCCTTA TTGCAGGTTT GGATGAAGCC GGCAGAGGTT GTCTGGCTGG GCCGGTGGTG GCAGGAGCTG TTATCATGCC GCCACGTTTA AAGGGTGACT GGGTGGAGAT GGTAAGGGAT AGTAAGGTCC TCAGCCCCGC AAAACGCGAA TATCTTTACT GTCACATTGT TTCCATGGCT GTAACCTTCG GGGTGGGTGC GGTAGATAAC GAACAGATTG ACAGCATGGG CATTGCCCCC GCTACCAGAC TGGCCATGAA ACAGGCCGTG GAAGACTTAA CTTGCCAGCC GGATTTTCTG CTGGTTGATT ACCTTAAGCT GCCGGATATT CCCCTGCCTC AAAAGGGCAT TGTAGACGGT GATGCTCTCT GTTTCAGTAT TGCCTGCGCC TCCATTGTGG CCAAGGTTAG CCGTGACCGC CTGATGTCCA AGCTGGATAT GGAGTATCCC GGATACTATC TTGCCAAACA CAAGGGGTAC GGTACGGCCC TGCATGTGGA GTGTATTTGC CAAAAGGGTA TTTCTCCTAT TCACCGCCGC ACTTTTGCCC CATTGAAGGG TATGATTGAT GGCCTATAA
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Protein sequence | MPATVICPSR AEEKLLRKQG FILIAGLDEA GRGCLAGPVV AGAVIMPPRL KGDWVEMVRD SKVLSPAKRE YLYCHIVSMA VTFGVGAVDN EQIDSMGIAP ATRLAMKQAV EDLTCQPDFL LVDYLKLPDI PLPQKGIVDG DALCFSIACA SIVAKVSRDR LMSKLDMEYP GYYLAKHKGY GTALHVECIC QKGISPIHRR TFAPLKGMID GL
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