Gene DehaBAV1_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0706 
SymbolrnhB 
ID5131298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp696521 
End bp697159 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content52% 
IMG OID640529617 
Productribonuclease HII 
Protein accessionYP_001214168 
Protein GI147669350 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCAA CTGTTATTTG CCCCAGCCGG GCTGAAGAAA AACTGCTTCG TAAACAGGGT 
TTTATCCTTA TTGCAGGTTT GGATGAAGCC GGCAGAGGTT GTCTGGCTGG GCCGGTGGTG
GCAGGAGCTG TTATCATGCC GCCACGTTTA AAGGGTGACT GGGTGGAGAT GGTAAGGGAT
AGTAAGGTCC TCAGCCCCGC AAAACGCGAA TATCTTTACT GTCACATTGT TTCCATGGCT
GTAACCTTCG GGGTGGGTGC GGTAGATAAC GAACAGATTG ACAGCATGGG CATTGCCCCC
GCTACCAGAC TGGCCATGAA ACAGGCCGTG GAAGACTTAA CTTGCCAGCC GGATTTTCTG
CTGGTTGATT ACCTTAAGCT GCCGGATATT CCCCTGCCTC AAAAGGGCAT TGTAGACGGT
GATGCTCTCT GTTTCAGTAT TGCCTGCGCC TCCATTGTGG CCAAGGTTAG CCGTGACCGC
CTGATGTCCA AGCTGGATAT GGAGTATCCC GGATACTATC TTGCCAAACA CAAGGGGTAC
GGTACGGCCC TGCATGTGGA GTGTATTTGC CAAAAGGGTA TTTCTCCTAT TCACCGCCGC
ACTTTTGCCC CATTGAAGGG TATGATTGAT GGCCTATAA
 
Protein sequence
MPATVICPSR AEEKLLRKQG FILIAGLDEA GRGCLAGPVV AGAVIMPPRL KGDWVEMVRD 
SKVLSPAKRE YLYCHIVSMA VTFGVGAVDN EQIDSMGIAP ATRLAMKQAV EDLTCQPDFL
LVDYLKLPDI PLPQKGIVDG DALCFSIACA SIVAKVSRDR LMSKLDMEYP GYYLAKHKGY
GTALHVECIC QKGISPIHRR TFAPLKGMID GL