Gene DehaBAV1_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0687 
Symboldef 
ID5132326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp679279 
End bp679782 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID640529597 
Productpeptide deformylase 
Protein accessionYP_001214149 
Protein GI147669331 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.132535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCC GCCGCATCTG TGAGTTGCCT GAGCCAGTTT TAAGGAAAAA GGCCAAAAAA 
GTGCCTTCTA TTGACGGTTC TATCCAAACT CTCATTGATG ACATGATTGA AACTATGAAT
AGCGCTGACG GAGCGGGGTT AGCCGCCCCT CAAGTAGGCG TATCTTTAAG GTTAGTGGTT
TTCCGTGAAC CAGATACCAA AGAAGCCACC GTGCTTATCA ACCCGGAGAT TATCAAAAAA
GAAGGTCAGA GACAGGTTAC CGAAGGTTGT CTCTCCATTC CGGGTTATTT TGGTGAACTT
ACCAGAGCCG AAACAGTAAC TGCCAAAGGT CTTGACCGAC ATGGCAAGGC CTGCCGTATA
AAAGGAACCG GTATTGTAGC CCAGCTGCTG GAACATGAAA CCGAACATCT GGACGGTATC
CTTTATATAG ACCACCTTGA GAGTGAAGAC CAATTGCACG AGATAGGGCC GGATGATGAA
ATGCCCGAAG AAATCCGTGA ATAG
 
Protein sequence
MAIRRICELP EPVLRKKAKK VPSIDGSIQT LIDDMIETMN SADGAGLAAP QVGVSLRLVV 
FREPDTKEAT VLINPEIIKK EGQRQVTEGC LSIPGYFGEL TRAETVTAKG LDRHGKACRI
KGTGIVAQLL EHETEHLDGI LYIDHLESED QLHEIGPDDE MPEEIRE