Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0644 |
Symbol | |
ID | 5131844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 633871 |
End bp | 635214 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640529547 |
Product | trigger factor |
Protein accession | YP_001214107 |
Protein GI | 147669289 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0575184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA CAGATAAAAA GATAGAGGGC TGTCAGGCCA GCATAACGGT AGAGATGGAT TCAACCGAGG TTGAAGAAGG TCTTTCCAAA ACATACCGCC GTCTGGTGAA AAAGGTGGAA ATTCCGGGCT TCCGCAAAGG TAAAGCCCCC AGAGATGTGT TTGAAAAATA TGTCAGCCGC GAAAAAATGC TGGACGAACT GGTAGATGAT ATTGTGCCGG AAGCCTGCCA GAAGGCTATA CAAGACGAGG AGATAAAACC CTTTGCCACC CCCAAGGTAG CTATGGTTAC CACCGACCCC TTTGTTTTTT CTGCCCGCAT ACCACTGCCT CCGGTAGTGG AGCTGGGTGA TTATAAAACC ATAAGAGCTA CTAAAGAGAC GGTAGAGATT GCCGAAGAAA ATATTGATAC GGTAGTAGAT CAGGTACTCC ATCAGCGAGC TACTTGGGAA ACAGCGGAAC GTCCTGTCAA AATGGGTGAC ATGCTACTTA TGCAGGTTGA AAGCACCCTT AATGGCGAAC CCTATCTGAA CCGTGAGGAT ATGCAGTATT CAGTTCGGGA AGAGGCCATT TATCCTGCCC CCGGTTTTGG CGGCTACCTG GTAGATATGG TTGCGGGTGA ACCCAAAGAA TTTTCAATAG TTTTCCCCGA AGACCATGCA CGGGCTGAAC TGGCCGGTAA AACAGCCGCT TTTAAGGTAA CTGTCCGTGA AATTAAAGAA GAAAAACTGC CTGAACTAAA TGATGCATTT GCCCACGAAT TAAACCCTGA GTTTAACACT CTGTCTGAGC TTCGCCAGCG TATTCGGGAA AATATGCAGG ACAGACAGGA TGACAAGGCT CAGGCCAAGT TTGAAGACCA GATTGTTGAA GCCCTGATAA AAATGAGTAA AATAGATTAT CCGGAAGTTA TGGTGGAAGC AGAGCTGGAC CAGATAATTG AACAGCAGCT GCAACGTCTG CAGAGTAATG TAAAAAGCCC CGAAGAATTC CGGGCTATGC TTTCCCAAAT GACACCGGAG GATATGCAGC AGCGGTATCG CCCTCTGGCG GAACAACGGG TAGCATCTTC GCTGGCGTTG GGTAAACTGG CCACCACCGA AAATCTGGTA CCCAATGATG AAGAAGTAGA TGCTGAAATT GAAAAGCTGA TTACAGATGC CGGTGATAAA AAAGAAGAAG AAAAAGCCCT TTACAATCAA CCGGAAACCA GAGGCCGTCT TATTCAGCTT CTGACTGCCC GTAAAACTAT GGCTTTTATA GATGAAATAG CCCTTCAGCC AGCTCTTGAG GCTGTCGAAT CTAAAGCTGA TGAAGATGAA AAAACAGAGG AGGCAGATAA ATGA
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Protein sequence | MKVTDKKIEG CQASITVEMD STEVEEGLSK TYRRLVKKVE IPGFRKGKAP RDVFEKYVSR EKMLDELVDD IVPEACQKAI QDEEIKPFAT PKVAMVTTDP FVFSARIPLP PVVELGDYKT IRATKETVEI AEENIDTVVD QVLHQRATWE TAERPVKMGD MLLMQVESTL NGEPYLNRED MQYSVREEAI YPAPGFGGYL VDMVAGEPKE FSIVFPEDHA RAELAGKTAA FKVTVREIKE EKLPELNDAF AHELNPEFNT LSELRQRIRE NMQDRQDDKA QAKFEDQIVE ALIKMSKIDY PEVMVEAELD QIIEQQLQRL QSNVKSPEEF RAMLSQMTPE DMQQRYRPLA EQRVASSLAL GKLATTENLV PNDEEVDAEI EKLITDAGDK KEEEKALYNQ PETRGRLIQL LTARKTMAFI DEIALQPALE AVESKADEDE KTEEADK
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