| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0625 |
|---|
| Symbol | |
|---|
| ID | 5131161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 613209 |
|---|
| End bp | 614315 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529528 |
|---|
| Product | L-threonine O-3-phosphate decarboxylase |
|---|
| Protein accession | YP_001214088 |
|---|
| Protein GI | 147669270 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.027617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCGTAT TGCCTAAACC GCAGCTGGAA AAACTAAAGC CATGTTACCA TGGAGGCCCT
AACTATGCCG AGCTTAAAAA ACTGGGTATA AGCCCTGATG CGGTTATGGA TTTTTCGGTT
AGCTCAAACC CGTATCCGGC ACCGGTGGAA CTTAAAGAAG CTTTGTCTTC TCTGGTTATT
GACCGCTACC CGGACTCTGA GTCTGCTGAA CTCAAAGAAT ATCTGGCGGG GAGGCTTTCG
CTGAAACCCG AAAACCTGAT TATAGGCAGC GGCTCTATGG AGGTTATCCG TCTGGTGGCT
GGGGCATATT TCGGGGTGGG GGATACAGTT CTGATACTTA AACCCACTTT TGGCGAGTAT
GAACTGGCGG TGGAAGTAGC TGGTGCCGAC ATAATTGAAC AGTGGGCAGA TGAAGAGAGC
GGCTTTAAGT TTGATTTGGA TTTAACCTGC CGCATTATTA AAAAACATCA ACCCAAAGCG
GTATTTATTT GTAATCCCAA CAATCCTACC GGGGTTTATC TTTCCAAAGC AGATATTGAA
AAAGTGCTGA ATGTCTGCAC TGATACACTG CTGGTGCTGG ATGAGGCCTA TATAGCGTTT
GCTGAAGATT GCTGGAAATC AGCAGATTTG CTTGATTCGG ACAATCTAAT AGTTATTCGC
TCTATGACCA AAGATTGTGC TCTGGCCGGG CTAAGGTTGG GTTACGGCAT GGCCTCGGCA
GAGATAATAG CCAACCTGAA AAAGATTTGC CCCCCATGGA ACGTGAATGC CGCTGCCCAA
AAAGCAGGGC TGGTTTGCCT GCGTCATCCC AGCTATCTGG CGGAATCTGA AAAGAAGATA
AAGGCCTCTA AAGAGTATTT GATGCAGGGT TTTATAAGGC TGGGTTTCAG TGTGTTTCCG
TCTGAGACCA ATTTTTTCCT GCTGAAGGTA AGGAGTGCTG CAGATTTTCG TTCAGCATTC
CTTAAATATG GGTTGATGGT GCGGGACTGC ACTTCATTTG GTCTGCCCCA ATATGTCCGT
ATAGCTCCCC GTACCCAAAG TGAGTGTGAA CACCTGCTTG AGGTTAGTGT TGAATTAAAA
AGTAAGTCTG AGATTTATCC AGCCTGA
|
|---|
| Protein sequence | MPVLPKPQLE KLKPCYHGGP NYAELKKLGI SPDAVMDFSV SSNPYPAPVE LKEALSSLVI
DRYPDSESAE LKEYLAGRLS LKPENLIIGS GSMEVIRLVA GAYFGVGDTV LILKPTFGEY
ELAVEVAGAD IIEQWADEES GFKFDLDLTC RIIKKHQPKA VFICNPNNPT GVYLSKADIE
KVLNVCTDTL LVLDEAYIAF AEDCWKSADL LDSDNLIVIR SMTKDCALAG LRLGYGMASA
EIIANLKKIC PPWNVNAAAQ KAGLVCLRHP SYLAESEKKI KASKEYLMQG FIRLGFSVFP
SETNFFLLKV RSAADFRSAF LKYGLMVRDC TSFGLPQYVR IAPRTQSECE HLLEVSVELK
SKSEIYPA
|
|---|
| |