| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0570 |
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| Symbol | |
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| ID | 5131083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 553422 |
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| End bp | 553991 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640529473 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001214033 |
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| Protein GI | 147669215 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0122304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTA TTATCGGACT GGGAAACCCC GGCAAAGAGT ACTCAGGCAA CCGCCACAAC
GTAGGTTTCC AGTGCCTGAG CCGCTTTGCT AAAGAAAATC ATATCAGCTT TGATAAAAAA
TGCTGCCTCT CCCGCACCGG CTCCGGCCGT ATAAATGACG AGGAAATAGT GCTGGCCAAA
CCCCAGACAT ATATGAACCT CTCCGGCAAG GCCGTCAATC AGTTGCTTCG TCGCTACAAC
CTGAAAGCCG CTGATATTAT TGTAGTTCAG GACGATCTGG ATTTGCCGGC AGGCAAACTC
CGCCTGCGTC TGGGAGGGAG CGCCGGCGGG CATAACGGGG TTTCTTCTAT TATTACAGAC
ATTGGCACCA AGGAATTTAT CCGCCTCAAG ATAGGTATCG GCAAACCGGA TGCCCGAAAT
AACGGGGCTG AAGTTGTAGA CCACGTACTG GGCAACTTTG GCGGCGAAGA GCGGGAGATT
ATAGAAACTG CTATTGCCCG GGCCGCCGAA GCACTCGCCT GCTTGATTAC TTCCGGGCTG
GATACTGCAT CCAACCGTTT CAACTGCTAA
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| Protein sequence | MKLIIGLGNP GKEYSGNRHN VGFQCLSRFA KENHISFDKK CCLSRTGSGR INDEEIVLAK
PQTYMNLSGK AVNQLLRRYN LKAADIIVVQ DDLDLPAGKL RLRLGGSAGG HNGVSSIITD
IGTKEFIRLK IGIGKPDARN NGAEVVDHVL GNFGGEEREI IETAIARAAE ALACLITSGL
DTASNRFNC
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