| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0559 |
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| Symbol | |
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| ID | 5132350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 544047 |
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| End bp | 545759 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529462 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_001214022 |
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| Protein GI | 147669204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.42957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA TGACCTGTCA GGTATTTTAC CGCAAATGGC GTCCCCAAAC TCTGGCTGAC
CTTGTCGGCC AGGAACACGT TGCCCACACT CTGAAAAACG CCCTTTCAAG CGGGCGTATT
GCTCAGGCGT ACCTTTTTTG CGGCCCCAGA GGTACAGGCA AGACCAGTAC CGGACGTATT
TTAGCCAAGG CAGTAAACTG CACCACCAAT CAGGGCAAGG GTGAACCCTG CAATACCTGC
CCCATGTGCC TTTCCATAAC CGAGGGCAGT TCCATGGATA TAATAGAAAT AGACGCCGCC
TCCAATACCG GAGTAGACGA TATCCGCGAA CTAAAAGAAA AGGTTCAGTA TTCCCCATCA
CTGGCAAATT ACAAAGTTTA TATCATAGAT GAAGTCCATA TGCTTTCCAA CAGTGCCTCA
AACGCACTCC TGAAAACGCT TGAAGAACCA CCGCCAAGGG TTATATTTAT ACTTGCCACT
ACTGAAATCC ACAAGGTTTT GCCCACCATC ATGTCCCGCT GCCAGCGGTT TGATTTTCAC
CGGGTATCTC TGGTGGATAT GACCCGCAAG CTGGGCAAGA TAAGTCTGGC AGAGGGTATA
AATGTTGAGC CGGAGGCCTT GAAACTGATA GCCCGTTCGG CTGGAGGCAG TTTCCGTGAC
GGTGAAAACC TGCTCCAGCA GATAGCCACC ACTTACGGAG CAGAAATAAG CCTGTCCCAG
GTACAGGCGG CTCTGGGTAT CAGCGGAGAT GAACGCATAA AAGCTCTGGC AGAAAATATA
CTTAAAAAAG ACATTAAAAA CGGGCTTAAA ACCCTTAACG CTGTATTGGC AGACGGGCTT
GATTTAAAAC AGTTCCGCCG TGAACTGCTG GATTACCTCC GCCAGATTAT GCTGGTAAAC
AGCGGATCGG AAAGCAGTCT GGAACTGACC GCTGATGAGA AAAAAGCCCT GCAAAAAGTC
TCCGGTATAA CCAATCTGGA GAATATTACC AAAGCTATAA AGGCCTTCAG CCAGCTGGAT
TTTTCATCCG ATACGGCTTC CAGCCTGAGC TTTGAGCTGG CACTGATAGA CGCTTCTCTG
GATAAAAATA CCGTACCGCT TCCAAATAAA CCCAAAGACG AAATACCGGC TGTTAAAGCT
GATAAACCTG CTCCGTTAGA AGCACCCAAG ACAGCAGCAT CTAATAATAT ACCCACCAAA
GAACCCAAAA CAGAAACCTT AACTAAACCG AATACATCTG CAGAAACCGC AGCTACTCCC
AAGCCTCACA CTAAGGAATC TGCACCCAAA CTTACCAGAG CGGCTATTCC GATTGAGGAA
AAACCCAAAT ACACCGCCCC TGCCCCGCCC AAAGAGGAAG AAAAAGTGCT TATTGGAGCT
GGGGATATAA TAGAACAGCT TAAAGTCAGC TGGAAAAGCA TACTGGACCA AGCACCGGAC
AATCTAAAAC GGTCAGCGGC AGTGGCCATA CTCCGCAGTG CCGGTGTCCG CCCGGTTTCT
ATGGATAAAA ATATAGTCAC CCTGTCCTTT AAATACAAGT ACCACAAGGA CAAGATTGAA
GAACTGGAAA ACCGTAAGGT GACTGCAGAA CTTATTTCAA ATTTTGTAGG CAAGACATGC
ACCCTGGTAT GCATATCTGA AGCCGAAACC AACCATTTGG TAAAACAAGC TCAGAAACTG
GGCGCCCAGA TTATATCAGT GGAGGAAAAG TAA
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| Protein sequence | MADMTCQVFY RKWRPQTLAD LVGQEHVAHT LKNALSSGRI AQAYLFCGPR GTGKTSTGRI
LAKAVNCTTN QGKGEPCNTC PMCLSITEGS SMDIIEIDAA SNTGVDDIRE LKEKVQYSPS
LANYKVYIID EVHMLSNSAS NALLKTLEEP PPRVIFILAT TEIHKVLPTI MSRCQRFDFH
RVSLVDMTRK LGKISLAEGI NVEPEALKLI ARSAGGSFRD GENLLQQIAT TYGAEISLSQ
VQAALGISGD ERIKALAENI LKKDIKNGLK TLNAVLADGL DLKQFRRELL DYLRQIMLVN
SGSESSLELT ADEKKALQKV SGITNLENIT KAIKAFSQLD FSSDTASSLS FELALIDASL
DKNTVPLPNK PKDEIPAVKA DKPAPLEAPK TAASNNIPTK EPKTETLTKP NTSAETAATP
KPHTKESAPK LTRAAIPIEE KPKYTAPAPP KEEEKVLIGA GDIIEQLKVS WKSILDQAPD
NLKRSAAVAI LRSAGVRPVS MDKNIVTLSF KYKYHKDKIE ELENRKVTAE LISNFVGKTC
TLVCISEAET NHLVKQAQKL GAQIISVEEK
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