Gene DehaBAV1_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0546 
Symbol 
ID5132204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand+ 
Start bp532765 
End bp533451 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content49% 
IMG OID640529448 
ProductDNA repair protein RadC 
Protein accessionYP_001214009 
Protein GI147669191 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTCCCG TACCTAGCAT ACGTGATTTG CCGCTTGCCG AAAGGCCCAG AGAAAGGCTT 
CAGAGCCTAG GGGCGGGGGC ACTTTCTTCG GTAGAACTTC TGGCGGTTAT TTTAGGGCGT 
GGAGTGGCAG GTGAACCTGT TTTGCAGAGT GCCCAGCGTT TGATTGCGCA TTTTGGCGGG 
CCTTCAGGTA TTGCTTGTGC CAGTGTTGAG GAACTTTCAA AATTAAAAGG TATCGGTCTG 
GCCAAGGCCT GCCAGCTGAA AGCCGCTTTT GAACTAGCCA AGCGGGCAGG CGGGATTAAA 
GGCGAATACC AGCCCTGTAT CAAAACCCCT GAAGATGTGT TTCAGATAAT ATATCCTCTG 
GTATGTGACG AAAAAAAAGA ATATTTTTTC TGCCTGATGC TGGATGTAAA AAGCCGGCTT 
ATTCGGGTAG GACATATATC CGTAGGCAGT CTGGAAGAAA GTGTGGTGCA TCCCCGTGAG 
GTTTTTAAAG AAGCACTTTC TGCCAGTGCC GCATCTGTAA TATTGGCGCA CAACCATCCC 
TCCGGAGATA CCGAACCCTC CCATGATGAT ATCGGGTTAT CTGCCCGGCT GAGAGAAGCC 
GGAGGCATAA TGGGGATAGA GGTACTTGAC CATATAATTA TAGGGGGACA AAGCTTTACC 
AGTTTAAAAA GACAGGGGCT TTTATAA
 
Protein sequence
MSPVPSIRDL PLAERPRERL QSLGAGALSS VELLAVILGR GVAGEPVLQS AQRLIAHFGG 
PSGIACASVE ELSKLKGIGL AKACQLKAAF ELAKRAGGIK GEYQPCIKTP EDVFQIIYPL 
VCDEKKEYFF CLMLDVKSRL IRVGHISVGS LEESVVHPRE VFKEALSASA ASVILAHNHP 
SGDTEPSHDD IGLSARLREA GGIMGIEVLD HIIIGGQSFT SLKRQGLL