| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0510 |
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| Symbol | |
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| ID | 5131926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 495507 |
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| End bp | 496811 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529412 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001213973 |
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| Protein GI | 147669155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAA GAATACAGGT ATTCCCCAAA AACACTGAAG TAAAAAATAA TCATCTGATT
ATCGGCGGGG TAGATGTTGC CGGGCTTTGT GCCAAATATG GCACGCCGCT GTATATTTTT
GACGAACTTA CCATCCGTCA GAATTGCCGT GATTTCAAGC GTGAGTTTTC ACGCCGCTAT
GCAGACAGCT CTGTCAGCTA TGCTTCGAAA GCCTTTTTGC ATCCGGCTTT GCTTAAAATA
CTGGCTGAAG AAGGCATGAG TCTGGATGTG GTTTCCGGCG GAGAGCTCTC CGTTGCCAAC
AACGCCGGTT TTCCTATGGA TATGGTTTAT TTGCACGGAA ACAACAAATC TGCCGAAGAA
CTAAGGCTGG CACTTCGTCT GCATGTGGGG CGGATTGTGG TAGACAGTTT TGATGAAATA
AAACTCCTGT CAAAACTGGC AGATGAGAGC GGGCATATAC CGGATATATT ACTCAGGATA
ACTCCCGGAG TAGATGCCCA TACTCATCAC TATATCACCA CCGGCAAGCT GGATTCCAAA
TTTGGTTTCC CCCTGTTTCA GGCAGCTGAA GCGGTAGGTT TAGCTATGGC TCAGGCCAGC
TTAAATCTGG TAGGTTTCCA TTTCCATATC GGTTCCCAGA TATTTGAAAC CCAGCCCTTC
CTTGACGCTA TAGATCTGGT GCTGGATTTT GCCGCACAGG TGCAGGAACG TTATGGTTTT
GATATAGAGG AACTGGATAT TGGCGGTGGC TACGGCGTTC AGTACGAAGT AGACAAGCCG
GCACCTCCCA TATCTGCTTA TGCAGAGGCT ATCGGAGCCA AAGTGGTATC CAAATGCCGC
AGTTTGAAGC TGACTCCTCC CAGTCTGAAT ATAGAACCGG GACGGGCCAT TATAGCTCAG
GCAGGTGTGG CTTTATATAC GGTAGGGGTG ATAAAAGATA TTCCCGGCAT TCGTTTGTAT
GCCTCGGTTG ACGGGGGCAT GGGGGATAAT ATCCGCCCGG CTCTTTACGA GGCTAAATAT
GAGGCAGTGG TGGCAAATAA CGTCCAGTCA GCTGAAAAGG AAAAGGTAAC TATAGCCGGT
AAGTTTTGCG AGTCCGGCGA TATACTTATA AGAGATATTG AACTGCCTTC CCTCAGGACA
GGTGACATAC TGGCAGTTCC CTGTTGCGGG GCTTACTGCC TGCCTATGTC CAGCAATTAC
AATGGTTACC ATCGCCCGGC GGTAGTAATG CTGAAAAACG GTGAAGACCG CCTGATACGG
CGGCGTGAAA CCGTGGAAGA CCTTAGCCGT CTGGATTCGG TCTAA
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| Protein sequence | MEPRIQVFPK NTEVKNNHLI IGGVDVAGLC AKYGTPLYIF DELTIRQNCR DFKREFSRRY
ADSSVSYASK AFLHPALLKI LAEEGMSLDV VSGGELSVAN NAGFPMDMVY LHGNNKSAEE
LRLALRLHVG RIVVDSFDEI KLLSKLADES GHIPDILLRI TPGVDAHTHH YITTGKLDSK
FGFPLFQAAE AVGLAMAQAS LNLVGFHFHI GSQIFETQPF LDAIDLVLDF AAQVQERYGF
DIEELDIGGG YGVQYEVDKP APPISAYAEA IGAKVVSKCR SLKLTPPSLN IEPGRAIIAQ
AGVALYTVGV IKDIPGIRLY ASVDGGMGDN IRPALYEAKY EAVVANNVQS AEKEKVTIAG
KFCESGDILI RDIELPSLRT GDILAVPCCG AYCLPMSSNY NGYHRPAVVM LKNGEDRLIR
RRETVEDLSR LDSV
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