| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0506 |
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| Symbol | |
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| ID | 5131913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 491229 |
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| End bp | 492410 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529408 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001213969 |
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| Protein GI | 147669151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGG CAGTTATACT GGCGGCTGGT GAGGGACAAC GCCTGCGGCC TTTTACCGCC
AGCAAATCAA AGGTGATGCT GTCTATTGCG GGCAAGCCCC TGCTTGAGTA TGTTATTGAA
TCCCTTGCCC AAAACGGTAT TCGGGATATT ATTCTGGTAG TGGGCTACAA ACGGGAACGC
ATATTTGACT ATTTCGGGCA GGGCGGGCGT TTTGGAGTAC AGATAAGCTA TGTCCAGCAA
CCAAACCAGC TGGGTACAGC CCATGCCCTC AGACAGGTAA AAGACAAAAT CAAAGGGGAT
TTTCTGGTTC TGAATGGAGA TCAGCTTATC AAGCCGTCAA CTATAAGCGG GTTTGTAAAA
CAGCCGCCGC AGGCGGTTAT GGTAAAAGCC ATAAACGGCG AAGACCCCAG CCGTTACGGG
GTGGTAACTT CTTCGGGCGG ACTTTTGACT TCCATAGAGG AAAAACCCAG CATAGCCAAA
AGCAATTTTA TAAATACCGG CATTTACTCT TTTTCAATGG CAGTGTTTGA CTATATTGGT
GAGCATCTGG ATATTCCGGT GGTGCTGCAG TCCATGCTCA AAGACGGGCT GGATATACAT
GTAGCAGAAA GCCAAGGAGC CTGGCTGGAT ATAGTCTATC CTTGGGATAT GTTAAAACTT
AATGCGGTGG TATCAGCCGA ACTTAAACCC GGAGTAGCCG GCACTATTGA AAGCGGCGTG
GTTATGAAGG GGCCGGTGCG GATTGGCAAA AATACGGTTA TCCGTTCAAA TTCGTATATC
GTGGGGCCGG TAATAATAGG TGAAGGCTGT GATATAGGCC CGAGTGTCTG TATTTACCCT
TCCACCAGTA TTGCAGATAA TGTAACAGTG GCTCCCTTCA GCCAGATAAA GAACAGCTTG
ATTTACAGCG GCAACAGTAT CGGAGTGGCT TCGGTTATTG AAGATTCGGT CATAGACCGG
GGTTGTGTGA TTTGCGGCCA GTTCAGTGCT CCCTCCGCCG AGATAGAAAC CCGGATAAAT
GATGGATTAC ATAAAATAAA AGTCGGAACG ATGATGGGTG AAGGCTGCAC CGTGGGGAAT
GCCGTAGTCC TTCAGAGCGG TACAGTAGTG GGCAATTCAA CCCGTATAGC TCCTTTGAGA
ACCCTGTCAG GCAATATCCC TGACGGCAGT CTGGTGGTAT AG
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| Protein sequence | MKQAVILAAG EGQRLRPFTA SKSKVMLSIA GKPLLEYVIE SLAQNGIRDI ILVVGYKRER
IFDYFGQGGR FGVQISYVQQ PNQLGTAHAL RQVKDKIKGD FLVLNGDQLI KPSTISGFVK
QPPQAVMVKA INGEDPSRYG VVTSSGGLLT SIEEKPSIAK SNFINTGIYS FSMAVFDYIG
EHLDIPVVLQ SMLKDGLDIH VAESQGAWLD IVYPWDMLKL NAVVSAELKP GVAGTIESGV
VMKGPVRIGK NTVIRSNSYI VGPVIIGEGC DIGPSVCIYP STSIADNVTV APFSQIKNSL
IYSGNSIGVA SVIEDSVIDR GCVICGQFSA PSAEIETRIN DGLHKIKVGT MMGEGCTVGN
AVVLQSGTVV GNSTRIAPLR TLSGNIPDGS LVV
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