| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0473 |
|---|
| Symbol | |
|---|
| ID | 5131892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 464347 |
|---|
| End bp | 465102 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640529375 |
|---|
| Product | methionine aminopeptidase, type I |
|---|
| Protein accession | YP_001213936 |
|---|
| Protein GI | 147669118 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000088934 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATAA TACTGAAAAC CGAAAAAGAA ATTGCTATAA TGCGGCGGGC TGGTCATATA
CTGGCGGTTG CTTTAGAAGA AGTTAAGAAG AATGTCAGAC CGGGAATAAC TACCCGGGAG
CTGGACGAGA TAGCTGAAAG GGAACTGTTA CGCAGGGGGA CTACTCCTTC GTTCAAAGGT
TACCAAGGCT TCCCGGCCAG TCTTTGTGCG TCTGTTAACG AAGAAATTGT TCACGGCATA
CCCGGGGGAC GGGTATTAAA AGAAGGCGAC ATAATATCGC TGGATATAGG CAACATATTA
GAAGGATTCC AGGCGGATAT GGCCGTAACA GTAGGGGTGG GTGAAATATC ACCTGCCGCC
CAACGGTTAA TATCTGCTAC TCAGGCCGCG TTGACGGTCG GGATTGTTCA AGCCAGGGCA
GGTGGGCATC TCGGCGATAT AGGTGCGGCA GTGGAGGAAT ATGCTCAAAG CAGAGGGTAT
GGGGTAGTCA GGGAATATAC CGGACATGGT ATAGGTCGGA ATATGCACGA AGACCCCCAG
ATACCGAACT TTGGCCGCCG GGGTAAAGGC CCGGAATTAA AAAAGGGTAT GACATTGGCC
ATAGAACCAA TGTTAAACAT TGGCACTGAA AAGACAAAAG TAGCCCCAGA TTGCTGGACA
GTGTATACTG CGGATGGTAG TTTGTCGGCT CATTTTGAGC ATACAGTTGC CATTACCGAT
GGTGAGCCGG AAATACTCAC CCTGATTGAA GAATAG
|
|---|
| Protein sequence | MAIILKTEKE IAIMRRAGHI LAVALEEVKK NVRPGITTRE LDEIAERELL RRGTTPSFKG
YQGFPASLCA SVNEEIVHGI PGGRVLKEGD IISLDIGNIL EGFQADMAVT VGVGEISPAA
QRLISATQAA LTVGIVQARA GGHLGDIGAA VEEYAQSRGY GVVREYTGHG IGRNMHEDPQ
IPNFGRRGKG PELKKGMTLA IEPMLNIGTE KTKVAPDCWT VYTADGSLSA HFEHTVAITD
GEPEILTLIE E
|
|---|
| |