Gene DehaBAV1_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0457 
SymbolrpsC 
ID5131032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp456648 
End bp457484 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content49% 
IMG OID640529359 
Product30S ribosomal protein S3 
Protein accessionYP_001213920 
Protein GI147669102 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000991742 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGCA AAGTTCATCC AATCGGGTTT AGACTTGGCA TTATTAAAGA CTGGAGTGCT 
AAATGGCACG CCAGTGATAA AAACTTTGCC GAATGCCTTA CTGAAGATCT TAAGCTTCGC
AAGGCTATCT CAAAGAAGTA TGTAGATGCC GCTATCTCTC AGGTAGATAT TGAGCGCCAG
TCCAACAAAG TGACGGTTTC CGTCCGGACT GCACGTCCGG GTATTGTAAT CGGACGCGGC
GGTCAGCGTG TTGATGAAAT GCGCCATTTC CTGGAAGATT TAATTGGCAA AAAGGTTCAG
TTGAATATTG TAGAAATATC TCAGGCTGAG CTTGACGCCT TTCTGGTTGC CCGGAGTGTG
GCAGAGCAGA TTGAACGCCG TGTTGCTTAC AGGCGTGCCA TGAAGCAAGC CATTTTCCGC
AGCATGCAGG CTGGTGCCAA GGGTATTAAA ATATGTGCCT CAGGTCGTCT GGGCGGCGTA
GAAATTGCCC GGCGCGAGGT AATGCACGAG GGGCGTGTTC CTTTGCACAC CCTGAGAGCT
GACATTGATT ACGGATGCAC CAGGGCTCAC ACTGCCCTTG GTGATGTAGG TATAAAGGTA
TGGGTATACC GTGGTGATAT CCTGCCCGAA GCTAAAGAGA AATCTGAATC CGCAGTAACG
GAAATGGCTG CTGTTATGGC TGATGCTCCT GCCGCAGTTG TTACCGAAAC CAAGGTTGCT
GATATTGCGG CCAAACCCAA GAGGGTTGTT AAGAAGGCCG AAGCTGAGAT TCCCGCTGAA
GAAAAACCCA AGCGTGTAGT CAAAAAAGCT GAGAACATAA CCAAGGAAGA GGAATAA
 
Protein sequence
MGRKVHPIGF RLGIIKDWSA KWHASDKNFA ECLTEDLKLR KAISKKYVDA AISQVDIERQ 
SNKVTVSVRT ARPGIVIGRG GQRVDEMRHF LEDLIGKKVQ LNIVEISQAE LDAFLVARSV
AEQIERRVAY RRAMKQAIFR SMQAGAKGIK ICASGRLGGV EIARREVMHE GRVPLHTLRA
DIDYGCTRAH TALGDVGIKV WVYRGDILPE AKEKSESAVT EMAAVMADAP AAVVTETKVA
DIAAKPKRVV KKAEAEIPAE EKPKRVVKKA ENITKEEE