Gene DehaBAV1_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0443 
Symbol 
ID5131143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp446855 
End bp447523 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID640529345 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001213906 
Protein GI147669088 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.277554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC CGCCAATCTG CTGTGTAATA ACCCAGCTTC CTCAGGCTGA GACCCTGAAG 
AAGAGTGAAG GTGCAGCCTT TTACGAACTG AGGCTGGATC TGCTGGGTGA AAACTGGCGG 
GAGACGGCGG TATTACTTAA CAAACCCTTT ATGGCCACCT GTCGCAGGTC TGCCGAAGGG 
GGCAGTTTTA AAGGAAATGA AGCTGAGCGG ATAAACAGGC TGGAAAAAGC CGCATCCGCC 
GGTGCCTTCA TGCTGGATAT TGAATATTCC ACCCCCAATC TGGAGGAAGT GCTTGGGCGG 
CTCAGACCAC AGGCAAAGTG CTTGTTATCC CATCACAACT TTACTGATAC TCCTTCTGCG 
GCCAAGCTTA AGACGCTCCT AAAGGATATG CTCACCCACC AGGCGGACAT ATATAAGGTA 
ATTACCACTG CCACCTCAAT AAATGATAAT ATTAACCTGC TTAATCTGAC AAAGGAGATA 
CCGGATAAGA AAATTGTCGC TTTTGCCATG GGGGAACCGG GCATTCTGAG CCGTATACTC 
TGCCCGCTGG CCGGAAGCCC TTTTACCTAC GCCAGCCTGA ATGACGGCAA TAAGTCTGCA 
TCAGGTCAGA TGACCCTGGC TCAAATGATT GAAATCTACC GGTCGGTAAA TTATGCAAAC 
CATACCTGA
 
Protein sequence
MKIPPICCVI TQLPQAETLK KSEGAAFYEL RLDLLGENWR ETAVLLNKPF MATCRRSAEG 
GSFKGNEAER INRLEKAASA GAFMLDIEYS TPNLEEVLGR LRPQAKCLLS HHNFTDTPSA 
AKLKTLLKDM LTHQADIYKV ITTATSINDN INLLNLTKEI PDKKIVAFAM GEPGILSRIL 
CPLAGSPFTY ASLNDGNKSA SGQMTLAQMI EIYRSVNYAN HT