| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0442 |
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| Symbol | aroE |
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| ID | 5131197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 446011 |
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| End bp | 446871 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529344 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001213905 |
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| Protein GI | 147669087 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.437298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCA TACCTGATGC ATTATTCGGG ATTATTGGTT ATCCGGTAAG TCACTCCGTC
TCACCGGCTA TGCAAAATGC TGCCTTCAAA CACTGCAAGC TGAATTATTT ATATTTGACT
ATTGCAGCCA AACCTGAAGA CCTGCAAAAC GTAATTGCCA GCATGCGTCC TCTGAATATA
CGCGGTCTGA ATGTGACCAT CCCCCACAAG ATAGAGGTCA TTAAATACAT TGATACCCTT
GACCCGGCGG CTAAAAAGAT TGGGGCGGTA AATACCATTG TCAATGAAAA CGGCCAGATG
AAAGGTTATA ATACTGATTT TGGCGGTTTT GTGCGTTTAC TGGAGCATAA CCGCATTGCC
CCTGCCAAAC ATCGCTTTGC CCTGCTGGGG GCAGGAGGCA GCGCCCATGC CATTTCACTG
GCTATTTGTA CCCTTGGCGG ACACTTGACC GTGCTTGCCC GCCAGGAGGA AAAAGCCAAA
GATCTGGCCG CAAAAATGTG CCTGCGTTTT AAAGGCAAGG CTCAGGGGCT GGAACTGAAT
GAGGCTAATC TGGAAGAAAC TTTAGCCGAA TCTGATATTA TCGTGAACTG CACACCCATA
GGTATGGGAA ATCTAGCCGG GCAAAGCCTT ATCTCCCCCC GTTTGCTGCG TCCTGACCTG
ACGGTCATAG ATGCTATCTA CAACCCATGC AAAACCCGCC TGCTGGAAGA TGCCGAAAAG
AAAGGCGCCA AGATAATAAA CGGGCTGGAA ATGCTGGTCT GGCAGGGAGC TATGTCATTT
GAAATCTGGA CAAGCCAAAA AGCCCCTTTC CGGGTGATGA TGAAAGAAGC AGAGATGGCT
TTAGATGAAA ACGAAAAATA A
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| Protein sequence | MQTIPDALFG IIGYPVSHSV SPAMQNAAFK HCKLNYLYLT IAAKPEDLQN VIASMRPLNI
RGLNVTIPHK IEVIKYIDTL DPAAKKIGAV NTIVNENGQM KGYNTDFGGF VRLLEHNRIA
PAKHRFALLG AGGSAHAISL AICTLGGHLT VLARQEEKAK DLAAKMCLRF KGKAQGLELN
EANLEETLAE SDIIVNCTPI GMGNLAGQSL ISPRLLRPDL TVIDAIYNPC KTRLLEDAEK
KGAKIINGLE MLVWQGAMSF EIWTSQKAPF RVMMKEAEMA LDENEK
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