Gene DehaBAV1_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0441 
Symbol 
ID5131150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp445497 
End bp446027 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content43% 
IMG OID640529343 
Productshikimate kinase 
Protein accessionYP_001213904 
Protein GI147669086 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.567872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA AAAATAACAT CGCTTTAATA GGCTTTATGG GCGCCGGTAA AAGTAGCATC 
TCAAAACTGC TCTCCGAAAA GCTTGGCAAA CCGCTGGTCA GTACAGATGC CTGCATAGAA 
ACACGGGAAG GCTTAAGTAT CAGCCATATA TTCAAGGAAA ATGGCGAAGA TTACTTTCGC 
CAGATGGAAA GCAAAGTACT GGAAGATATC TGCCAGAATC CAAACCAGAT TATAGACTGC 
GGCGGCGGCA TAGTTACCCG CCCCCACAAC CTGAGCATTA TGCGTTTAAA CTGTCTGGTG 
GTCTATCTGG AAAGCCGCCC TGAAGATTTA GAAAACCGCT TGAAAAATCA TACAAACCGT 
CCATTATTTA ATGCTGAACG TTCAGATAAG ATGTTAAAGT TGCTGGAAAG CCGATTGCCG 
CTATACAGAG ATGCGGCGGA TATCACTGTT TCCACCCATA ACAAATCATG CCATGAAGTC 
TGCGAAGAAA TAGAAGACAG TTTGAGGAAA TATGAAAATA CATCTGGATA A
 
Protein sequence
MKTKNNIALI GFMGAGKSSI SKLLSEKLGK PLVSTDACIE TREGLSISHI FKENGEDYFR 
QMESKVLEDI CQNPNQIIDC GGGIVTRPHN LSIMRLNCLV VYLESRPEDL ENRLKNHTNR 
PLFNAERSDK MLKLLESRLP LYRDAADITV STHNKSCHEV CEEIEDSLRK YENTSG