Gene DehaBAV1_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0438 
Symbol 
ID5131793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp442094 
End bp443170 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content48% 
IMG OID640529340 
Productprephenate dehydratase / chorismate mutase 
Protein accessionYP_001213901 
Protein GI147669083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000533391 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTT CTGACCTGCG CAAACAGATT GATAACCTGG ATACCGAGCT TGTAAAGCTG 
ATGGCAAAGC GGCTTGAAGT GTCAGACCAG ATAGGCAAAA TCAAAGAAGA AACCAATTCG
CCTGTTCAGG ACCTTTCCCG CGAATCAGAG GTACTGAACA GAGTTCAGTC ACTTGCCCAG
TCTCTGGGTC TTGACCCGCA GGATATTGAA TCCCTGTATC AGGAAATCCT TTTCATATCT
AAAAAACAGC AACGCTTCAC TGTATCCTTT CAGGGAGCGG CCGGCGCATA CAGTGAAGAA
ACCGCCTTGA AGATATTCGG CCCTAACACT CTTACCCTGC CCTGTGAACA GCTGGATGCT
ACTTTTGAAG CTGTGGAAAA GGGTATGGCC CGTTTTGCAG TAGTGCCGGT GGAAAACTCG
CTTGAGGGCT CTATATCCCG CACCTATGAC CTGTTGCTGG ATTCCAACCT TATGGTTGCC
GCCGAACATG AGCTCAGGGT TTCACACTGC CTGATAGCCA ACCCTGCAAC CAACCTTGAA
GCGGTAAAAA CCATTTATTC CCACCCGCAG GCACTGGGTC AATGCCAGTC ATTTCTGAAG
CATCTGCGGG CAGAGCTGAT ACCTACCTAC GATACCGCCG GCAGTGTCAA AATGATTAAA
GAAAAAGGTC TTTTAAACGG GGCGGCTATC GCTTCCGAAA GAGCGGCCGT AATATATAAT
ATGAAGGTAC TGGAACGGGA AATAGAGGAC AATATAAACA ACTACACCCG TTTCTTTGTC
CTTGCCAAGC AGGATTCCGC TCCTACCGGG AGTGATAAAA CATCTGTAGT TTTTGCCGTC
AAACATCAGG CTGGGGCGCT GTATGATTTT ATAAAGGAAC TGGCCTCCCG CGGAATAAAC
ATGACCAAGC TGGAATCCCG TCCCACCCGT CTTAAACCCT GGGAGTACAA TTTTTACCTT
GATATAGAAG GCCACCGTCA GGACGAAAAT GTGAAACAGG CACTGGCAAA AGCCGATGAC
CATGTAATAT TTATGAAAGT ACTCGGTTCT TACCCGAAAA TGAAAAAACA CATATGA
 
Protein sequence
MNLSDLRKQI DNLDTELVKL MAKRLEVSDQ IGKIKEETNS PVQDLSRESE VLNRVQSLAQ 
SLGLDPQDIE SLYQEILFIS KKQQRFTVSF QGAAGAYSEE TALKIFGPNT LTLPCEQLDA
TFEAVEKGMA RFAVVPVENS LEGSISRTYD LLLDSNLMVA AEHELRVSHC LIANPATNLE
AVKTIYSHPQ ALGQCQSFLK HLRAELIPTY DTAGSVKMIK EKGLLNGAAI ASERAAVIYN
MKVLEREIED NINNYTRFFV LAKQDSAPTG SDKTSVVFAV KHQAGALYDF IKELASRGIN
MTKLESRPTR LKPWEYNFYL DIEGHRQDEN VKQALAKADD HVIFMKVLGS YPKMKKHI