Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0438 |
Symbol | |
ID | 5131793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 442094 |
End bp | 443170 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529340 |
Product | prephenate dehydratase / chorismate mutase |
Protein accession | YP_001213901 |
Protein GI | 147669083 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase [COG1605] Chorismate mutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000533391 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTTT CTGACCTGCG CAAACAGATT GATAACCTGG ATACCGAGCT TGTAAAGCTG ATGGCAAAGC GGCTTGAAGT GTCAGACCAG ATAGGCAAAA TCAAAGAAGA AACCAATTCG CCTGTTCAGG ACCTTTCCCG CGAATCAGAG GTACTGAACA GAGTTCAGTC ACTTGCCCAG TCTCTGGGTC TTGACCCGCA GGATATTGAA TCCCTGTATC AGGAAATCCT TTTCATATCT AAAAAACAGC AACGCTTCAC TGTATCCTTT CAGGGAGCGG CCGGCGCATA CAGTGAAGAA ACCGCCTTGA AGATATTCGG CCCTAACACT CTTACCCTGC CCTGTGAACA GCTGGATGCT ACTTTTGAAG CTGTGGAAAA GGGTATGGCC CGTTTTGCAG TAGTGCCGGT GGAAAACTCG CTTGAGGGCT CTATATCCCG CACCTATGAC CTGTTGCTGG ATTCCAACCT TATGGTTGCC GCCGAACATG AGCTCAGGGT TTCACACTGC CTGATAGCCA ACCCTGCAAC CAACCTTGAA GCGGTAAAAA CCATTTATTC CCACCCGCAG GCACTGGGTC AATGCCAGTC ATTTCTGAAG CATCTGCGGG CAGAGCTGAT ACCTACCTAC GATACCGCCG GCAGTGTCAA AATGATTAAA GAAAAAGGTC TTTTAAACGG GGCGGCTATC GCTTCCGAAA GAGCGGCCGT AATATATAAT ATGAAGGTAC TGGAACGGGA AATAGAGGAC AATATAAACA ACTACACCCG TTTCTTTGTC CTTGCCAAGC AGGATTCCGC TCCTACCGGG AGTGATAAAA CATCTGTAGT TTTTGCCGTC AAACATCAGG CTGGGGCGCT GTATGATTTT ATAAAGGAAC TGGCCTCCCG CGGAATAAAC ATGACCAAGC TGGAATCCCG TCCCACCCGT CTTAAACCCT GGGAGTACAA TTTTTACCTT GATATAGAAG GCCACCGTCA GGACGAAAAT GTGAAACAGG CACTGGCAAA AGCCGATGAC CATGTAATAT TTATGAAAGT ACTCGGTTCT TACCCGAAAA TGAAAAAACA CATATGA
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Protein sequence | MNLSDLRKQI DNLDTELVKL MAKRLEVSDQ IGKIKEETNS PVQDLSRESE VLNRVQSLAQ SLGLDPQDIE SLYQEILFIS KKQQRFTVSF QGAAGAYSEE TALKIFGPNT LTLPCEQLDA TFEAVEKGMA RFAVVPVENS LEGSISRTYD LLLDSNLMVA AEHELRVSHC LIANPATNLE AVKTIYSHPQ ALGQCQSFLK HLRAELIPTY DTAGSVKMIK EKGLLNGAAI ASERAAVIYN MKVLEREIED NINNYTRFFV LAKQDSAPTG SDKTSVVFAV KHQAGALYDF IKELASRGIN MTKLESRPTR LKPWEYNFYL DIEGHRQDEN VKQALAKADD HVIFMKVLGS YPKMKKHI
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