Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0404 |
Symbol | |
ID | 5131178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 407134 |
End bp | 408672 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640529306 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001213867 |
Protein GI | 147669049 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0534144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA TCTCAAGCGT CCAAATGCGC CAGATAGAAG ATGCCTGCCT GAAACAGGGC ATTAGCACCG AAACCCTGAT GGAAAATGCC GGCAGGGCGG TGGCTGTGTT TGCCCGCCAT CTGCTGGAAG AGCAAAATGG CTGTCGGGTG CTGATACTGG CGGGTGCGGG CAATAACGGG GGTGACGGGC TGGTTGCCGG ACGTTATCTG CGGAGCTGGG GTGAAAAGGT AAGCATATTT GTGCCTTTTA TAGATACCCC AAAAGGCAAA ACCGTTCAAG GCTGTTTGGA AGCCTCAGGT GATATATTTG CAGGTTTAGC GGAACTTGAA GAGCATCTGG CGGATGCAGA TTTGGTAATA GATGCTTTGC TGGGTACAGG CGTAAACCGC CCGCTTGAAG GCATTTATAA AGAAGCTCTG CAAATGACAG CAAACGTTAG AAATACCAGA CCAGAGATGC AAGTGCTGGC CGTAGATTTA CCCTCCGGTT TAAATGCTGA TACCGGGCAG GCGGATGATG CTTGCCTAAA GGCGGACTTT ACACTTTCGC TGGGCATTGC CAAGCAAGGG CTTTTTACCC ACCGCGGGCT GGAATTAAGC GGGGCGGTTT CGGTGGCGGA TATCGGCATA CCGCCTGAAC TGACAACCGA TATCCAAGCC GTTTTGATTG AAAAAGACTG GGCAAAGAGT GTTTTGCCTG TTCGTTCCCC CCATGCCAAC AAGGGCAATT TTGGGCGGGT GATGATTGTA GCCGGGAGTG ACCGTTATAT AGGGGCGGCC ATATTAGCAG GGAGTGCCGC TATGCGTGTT GGTGCGGGCT TGGTTACACT GGCTTTGCCG GAAAGTTTGA CCGGAGCGGT AGCGAGCAGA ATACCTGAAG CTACTTATCT GCCTTTGCCT GAAGTATCCT CCGGTACTGC GGATAACTCT GCTGCACGCT TTGTCCTGAG TGAACTGGGT AAATATGATG TACTCCTTAT AGGGCCAGGT CTGGGTCAAA CCGGGTATTC CGCCAGACTG GTTACCGAAG TGCTCTCAAA CCTGCCCGTA GGGCTTAAGG TTATAATAGA CGCAGATGCA TTAAATATAC TTTCAGCTAT CACGGATTGG TGGCTGGAAT ATAAATTTGA TGCGGTACTC ACCCCGCATC CGGGTGAAAT GGCCCGTCTG GCAAAAACTA CCACCGAGGC TGTTCAGTCT GACCGTTTCG GGCTTTGCCA AAAGTTTGCC TGCAAATGGG GCAAGACGCT TATCCTGAAA GGTGCCGGGA CAATAGTGAC ATCACCGCAG GGGGAAACCC TGTGCAATCC GGCGGCTAAC CCTGTGCTGG CTTCAGCCGG TACGGGTGAC GTACTTGCCG GAATAATAGG CGGTCTTTTG GGGCAGGGCG TAAGCCTTTT TGAGGCGGCA GGACTGGGAG TTTACCTGCA CTCTCTGGCC GCAGAAGCAT TGCGGAGTGA GATAGGTGAT GCCGGTGTAC TGGCTTCGGA TTTGCTGTTA AAATTGCCTG TGATTATAAA AGGATTGAAA CAGGGCTAA
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Protein sequence | MEIISSVQMR QIEDACLKQG ISTETLMENA GRAVAVFARH LLEEQNGCRV LILAGAGNNG GDGLVAGRYL RSWGEKVSIF VPFIDTPKGK TVQGCLEASG DIFAGLAELE EHLADADLVI DALLGTGVNR PLEGIYKEAL QMTANVRNTR PEMQVLAVDL PSGLNADTGQ ADDACLKADF TLSLGIAKQG LFTHRGLELS GAVSVADIGI PPELTTDIQA VLIEKDWAKS VLPVRSPHAN KGNFGRVMIV AGSDRYIGAA ILAGSAAMRV GAGLVTLALP ESLTGAVASR IPEATYLPLP EVSSGTADNS AARFVLSELG KYDVLLIGPG LGQTGYSARL VTEVLSNLPV GLKVIIDADA LNILSAITDW WLEYKFDAVL TPHPGEMARL AKTTTEAVQS DRFGLCQKFA CKWGKTLILK GAGTIVTSPQ GETLCNPAAN PVLASAGTGD VLAGIIGGLL GQGVSLFEAA GLGVYLHSLA AEALRSEIGD AGVLASDLLL KLPVIIKGLK QG
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