Gene DehaBAV1_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0376 
Symbol 
ID5131096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp383884 
End bp384894 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content49% 
IMG OID640529277 
Productthiamine-monophosphate kinase 
Protein accessionYP_001213839 
Protein GI147669021 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000100776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTT CTGACATAGG CGAATGCCAG CTGATAGACA GACTGAACAT TCTTTTGCAC 
CAAAAGCCTG ATGAAAATAC CCCTGCCCGT GAAAACCTGA TACTGGACAT TGGTGATGAT 
GCCGCTGTTT TTCTCCCACA GGGATACCAG CTGGTTACCG TAGACAGCCT GATTGAAAAC 
GTACATTTCA ACCGAAGCAT GCTTAATTGG GCAGATCTGG GTTACAAAGC TCTGGCTATA 
AACATGAGCG ATATTGCCGC CATGGGCGGG CTCCCCCAGT ATGCCGTAGT GAATATTGAC 
CTGCCGCCGG ATACTCTGGT TTCCAGCGTA ACAGACTGCT ATAACGCTAT GTACAGTCTG 
GCTAACAAAT ACCAGACTGT AATAATAGCC GGGGATACCA ACCAGTCTTC TATTATAAAT 
CTGGCTATTA CCCTGCTGGG TTCGGCGGAA AACCCGTCCT GCCTGCTTAC CAGAAATGCC 
GCTCAGGCAG GACAAAAAAT AGCCGTTACC GGTTATCTGG GCAACGCTGC TGCCGGTTTG 
GATATGCTTT TAAACCAAAC CGAAGTTACA GATGAAAGCC GCCAGATATT TTACCGCTCT 
TTTTACCGCC CTGAACCGCG TATTAATGAA GCCCGGTTAC TGGTCAAAGA GGGCGTCCAT 
TGCTGTATAG ATATAAGCGA CGGGCTGGTG ACTGACCTTG GGCATATACT CAGGCAGAGC 
CGGGTAAGTG CCAGAATAGA GCTTGATAAA CTGCCACTCC ATCCCAGCCT GCGCCTCAGT 
TACCCTTTGC AGGCCCAAAA CATGGCACTC TACGGGGGTG AAGATTACGA ACTATTATTT 
ACCGCCTCTG CCAAGGTGAT AGAGCAAATA TCGGTGCAGA GCCATATACC GGTTACTATC 
ATAGGCGAAA TTATTCCGGG TAAGCCGGAG GAACTAAAAC TAGTGGATAA AGATGGGAGG 
GCCCTTCAGC CGGAAAAGAA CGGCTGGGAG CATTTTAAAA AACCGAAATG A
 
Protein sequence
MKVSDIGECQ LIDRLNILLH QKPDENTPAR ENLILDIGDD AAVFLPQGYQ LVTVDSLIEN 
VHFNRSMLNW ADLGYKALAI NMSDIAAMGG LPQYAVVNID LPPDTLVSSV TDCYNAMYSL 
ANKYQTVIIA GDTNQSSIIN LAITLLGSAE NPSCLLTRNA AQAGQKIAVT GYLGNAAAGL 
DMLLNQTEVT DESRQIFYRS FYRPEPRINE ARLLVKEGVH CCIDISDGLV TDLGHILRQS 
RVSARIELDK LPLHPSLRLS YPLQAQNMAL YGGEDYELLF TASAKVIEQI SVQSHIPVTI 
IGEIIPGKPE ELKLVDKDGR ALQPEKNGWE HFKKPK