Gene DehaBAV1_0370 details

Gene Information

• Locus tag: DehaBAV1_0370
• ID: 5132129
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: -
• Start bp: 378429
• End bp: 380243
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640529271
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_001213833
• Protein GI: 147669015
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000686263
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAA ATTGGAAACG CAGCACCATT ATTTATGTCG TGATGCTGGT GGCTATCATA 
GCAATCTTTT CGTTTCTGGT GCCAAATGCC CAGAAACCGG AGGAAGTGCC TCTGAGCCAG 
ATAATAACCC TGTCTCAGGA ACACAAGATT GCCGAAATTA CAGTTGACAG CGAAACCATA 
GAGGTAACTA CTACCGATGG TACAAAACTG TCCACTGTAA AGGAATATAT TGCCAGTATT 
TACGAAATTG AAGGTCTGGA CCTGACCGAC GTCAAGGTAA ACATCCAGCC GGCGGGCGGG 
CTGGACTGGG GCACCATGAT TCTTACCTAT CTGCCCTTCC TGATATTCGG CGGTCTGCTT 
ATCTTCATCT TCACCCAGGC AAGGGGCGCC AACAATCAGG CTGTTTCATT CGGCCGGTCC 
AAGGCCAAAC TCTTCAATAT GGACAAGCCC ACCATCACCT TTGCCAATGT GGCCGGGGTA 
GATGAAGCCA AACAGGAAGT AGGCGAAGTT GTTGAATTCC TGAAATCCCG TGAGAAGTTT 
CAGGCACTGG GTGCCCGCAT TCCCAAGGGT ATTTTGCTGA TAGGACCTCC CGGTACAGGT 
AAAACCCTGC TGGCCAAGGC TATTGCCGGA GAAGCAGGCG TACCCTTCTT CTCTATAAGC 
GGCAGTGAAT TTGTAGAAAT GTTTGTGGGT GTAGGTGCTT CAAGAGTACG TGATTTGTTT 
GATCAGGCTA AAAAGAATGC CCCCTGCATT ATCTTCATAG ACGAAATAGA TGCTGTCGGA 
CGCCAGCGCG GCGCAGGCTT GGGCGGCGGA CATGACGAAC GGGAACAGAC CCTTAACCAG 
ATACTGGTGG AAATGGACGG GTTTGATACC GATACCAGTG TAATAGTAGT GGCGGCAACC 
AACCGTCCTG ATATACTTGA CCCGGCCCTG CTCCGTCCCG GCCGTTTTGA CCGCAGAGTA 
GTGCTGGACA AGCCGGATAT AACCGGACGT GAAGCCATAC TAAAAATCCA TGCCAAGGGC 
AAACCTCTGG CAGATACGGT TAACCTGGAA AATTTGGGCA AGCAGACAGT CGGTTTTTCA 
GGTGCAGATT TGGCAAACCT TCTTAACGAA GCCGCCATAC TGGCCGCCCG TAAAAACCGC 
AAGGTAATTG AAACCGAAGA CCTTGAGGAA TCTATTGACC GGGTTATTGC AGGGCCTGAA 
CGCAAGAGCC GCCGCATAAG CACCCAGGAA AAAGAAGTAA CCGCTTACCA CGAAACCGGA 
CACGGGCTGG TACTTCGGTT GGTGCAGGGT GCTGACCCCG TCCACAAGAT ATCCATTGTG 
GCCAGAGGCA TGACGCTGGG GCACACCCGC CAGTTGCCCA CTGAAGACCG CTACCTGATG 
ACCCGTTCCC AATTCAAGGG CATGATGGCC GGGCTTCTGG CCGGCTATGT TGCAGAAGAA 
CTGACCTTTA AAGAACTCTC CACCGGTGCT TCAGATGACC TGCGACGGGC TACCGATATT 
GCCCACAAAA TGGTCACCAG CTACGGCATG AGTGACAAAC TGGGGCCGCG CACCTTTGGC 
AACAAAGAAG AAATGGTCTT TTTGGGACGC GAAATATCCG AGCAAAAAGA TTACGGCGAG 
AAAATAGCTG ACATGATTGA CGATGAGGTT CATGGGTTGA TTGAGGAAGC CCACCAGAAA 
GCCAGGAAAA TACTGACCGA AAATAAAAAC CGCCTGAAGT TCATTGCCGA AAAACTGGTA 
GAAAAAGAAA CTCTGGAAGG GGTTGAGCTG GAAAGCCTGT TTACAGGTGA ACTTCCAATA 
GCTGAATCTA CTTAA 

 

Protein sequence

MNSNWKRSTI IYVVMLVAII AIFSFLVPNA QKPEEVPLSQ IITLSQEHKI AEITVDSETI 
EVTTTDGTKL STVKEYIASI YEIEGLDLTD VKVNIQPAGG LDWGTMILTY LPFLIFGGLL 
IFIFTQARGA NNQAVSFGRS KAKLFNMDKP TITFANVAGV DEAKQEVGEV VEFLKSREKF 
QALGARIPKG ILLIGPPGTG KTLLAKAIAG EAGVPFFSIS GSEFVEMFVG VGASRVRDLF 
DQAKKNAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ ILVEMDGFDT DTSVIVVAAT 
NRPDILDPAL LRPGRFDRRV VLDKPDITGR EAILKIHAKG KPLADTVNLE NLGKQTVGFS 
GADLANLLNE AAILAARKNR KVIETEDLEE SIDRVIAGPE RKSRRISTQE KEVTAYHETG 
HGLVLRLVQG ADPVHKISIV ARGMTLGHTR QLPTEDRYLM TRSQFKGMMA GLLAGYVAEE 
LTFKELSTGA SDDLRRATDI AHKMVTSYGM SDKLGPRTFG NKEEMVFLGR EISEQKDYGE 
KIADMIDDEV HGLIEEAHQK ARKILTENKN RLKFIAEKLV EKETLEGVEL ESLFTGELPI 
AEST