| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0362 |
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| Symbol | |
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| ID | 5131467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 370583 |
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| End bp | 371464 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640529262 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001213825 |
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| Protein GI | 147669007 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000425814 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCG GTACTTTCAA AGTAAAATCT GGCCTGGCCC AAATGCTGAA GGGCGGGGTA
ATTATGGATG TAACTACCCC CGAACAGGCT AAAATAGCAG AAGAAGCAGG TGCCTGTGCC
GTTATGGCAC TGGAACGCGT ACCTTCGGAT ATCAGAGCGG CCGGCGGGGT AGCCCGCATG
GCAGACCCCA CTATTATAGA GCAGATTATG AAAGTAGTCA GCATACCCGT TATGGCCAAG
TGCCGTATCG GTCATTTTGT GGAAGCCCAA ATACTGGAAT CCATGGGGGT GGACTATATT
GACGAGTCCG AAGTGCTTAC CCCGGCTGAC GAAAATTTCC ACGTCTGGAA ACATGACTTT
AAAGTCCCCT TCGTCTGCGG CTGCCGTGAT CTGGGCGAAG CCCTAAGGCG GATTGGCGAG
GGTGCGGCTA TGATACGCAC CAAAGGTGAA GCCGGTACCG GCAACATTGT GGAAGCGGTA
AGGCATATGC GTTCCGTTAT GGGCTCTGTC AGAAGGGTAC AGTCCATGTC ACCTGACGAA
TTGTCCGCTT ATGCCAAAGA GATAAATGCA CCTCTGGAAC TGGTGCTTGA ACTTCATAAG
ACCGGCAAAC TGCCGGTAGT GAACTTTGCC GCCGGCGGAG TAGCTACCCC GGCCGATGCG
GCCTTGATGA TGCAACTGGG GGCTGACGGG GTATTTGTGG GCTCAGGTAT ATTTAAATCA
TCAAACCCCT CGGCCATGGC CAAAGCAGTA GTAAAGGCTG TGACCCACTA TAAAGATGCC
CAAATACTGG CTGAGATATC CAAGGGTCTG GGTGATGCCA TGCCCGGTCT GGATATTAAA
CAGATAGATC CCGATAAACT TATTTCCCAG CGGGGTTGGT AA
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| Protein sequence | METGTFKVKS GLAQMLKGGV IMDVTTPEQA KIAEEAGACA VMALERVPSD IRAAGGVARM
ADPTIIEQIM KVVSIPVMAK CRIGHFVEAQ ILESMGVDYI DESEVLTPAD ENFHVWKHDF
KVPFVCGCRD LGEALRRIGE GAAMIRTKGE AGTGNIVEAV RHMRSVMGSV RRVQSMSPDE
LSAYAKEINA PLELVLELHK TGKLPVVNFA AGGVATPADA ALMMQLGADG VFVGSGIFKS
SNPSAMAKAV VKAVTHYKDA QILAEISKGL GDAMPGLDIK QIDPDKLISQ RGW
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