Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0314 |
Symbol | |
ID | 5131463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 322188 |
End bp | 323684 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529214 |
Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
Protein accession | YP_001213778 |
Protein GI | 147668960 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000179563 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGAATA AAAACCAGCT GCTCCATACA GATAAAAAAA CCGCTGCCTT GCTTGAAGAC CTCCACCGTT TGCTTTCAGC GGAAGGCACT GAAACCTATT TGGTGGGCGG GTTTTTGCGT AACCTTGTGC TTAAAAAACC GACTGCAGAT ATTGACCTGT GCGTAATAGG TAACGGCTTT TCTGCTGCCT CCAAGATATC CCGTCATTTC AAAGCCACTC AGATAGTACT TGATGCAGAT AATGACGTAA CCAGAGTCAT GCTGCCCGGT TTTCAGCTGG ATATTTCCGG CACGCCAGAT ATTTCGGCAA ACCTTGCCCG GCGTGATTTC AACCTTAACG CCATGGCCGC ACCCTTGTCT GCCTTAAATC ACGGCAATCT GCAAATACAC GCTATTGTTG ACCCCATGCA GGGGCTTAGG GATATTGAAA ACAGGGTCAT ACGGGTAACC TCATCCGAAG TTTTTAGAGC TGACCCCATC CGGTTGATAC GGGCTATACG TTTGTCAGCC GAACTCGGCT TTGAGCTGGA CGAACAAACT CAAAGTCTTA TTACAACCCA CGCCGGCCTG ATATCAACTG TTGCCGGCGA AAGAATTCGG GAAGAACTCC TGAAACTCCT TGAAACCAGC CAGACAGGCA TCTGGGAAAA GTGCCTCGAA CTGGGGCTTT TACTAAGCAT ATTCACGGAG CTTGATCCCT GCTACCGGCA CCCACAGCCC TACGAACACA CATGGGATGT GCTTGAACAC TCTATAAAAA CCATTTATGC ATTGGACGCC ATACTGGGCA AATCTGTCTG GCCATACCAA AAACCTGAAA TAACCAGTGA AATTTACCGT GACAGTAATT TTGAAAAATA TTTCATCCAG CAAATAAGCG GTACTTCCCG TATCCGCACT CTGGCCAAAC TGGCCGCCCT GCTGCATGAT ATTGCCAAAC CCCAAACCCG CAGCACAGAC CCTGACGGAC GGGTACGTTT TACCGGTCAC CCGCTGGAAG GTAGCCGAAT TACATCTGAA ATACTCACCC GTCTGCGTTT TTCAAAAAAA GAAATCTCAC TGGTAGAGAA AATGGTCTGC TACCATCTGC GTCCGGTACA GATGAATCCT GACGGCCAGT TGCCGTCTTC AAAAGCTATT TACCGCTATT TCCGTGACCT TTCGGAAGCC GCCACTGCCA CCCTTTACCT AAGTCTGGCA GACCATTTGG CAACAGATGG GCCAAATTTG ATGGTGGCAA ATTGGCAAGA ACATGTTAAT ATAGTAGCGC ACATTTTATC AGAGCAGAAA AGACAGCTAA CCAGACTGAC TCCAAAACGT TTAATAACCG GTACCGACCT GATAGAGCGC TTTGCCCTCA GGCCGGGTCC CCGAATAAAA ATCCTGCTTG GTGAAATTGC CGAGGCCCAG GCGGCCGGTG AAATAAAAAC CCGCCGGGAG GCCTTTAAAT TTATCAGCCA AAGGCTTGGG GGCAAGCCAG AAAATAATCT AAATTAG
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Protein sequence | MTNKNQLLHT DKKTAALLED LHRLLSAEGT ETYLVGGFLR NLVLKKPTAD IDLCVIGNGF SAASKISRHF KATQIVLDAD NDVTRVMLPG FQLDISGTPD ISANLARRDF NLNAMAAPLS ALNHGNLQIH AIVDPMQGLR DIENRVIRVT SSEVFRADPI RLIRAIRLSA ELGFELDEQT QSLITTHAGL ISTVAGERIR EELLKLLETS QTGIWEKCLE LGLLLSIFTE LDPCYRHPQP YEHTWDVLEH SIKTIYALDA ILGKSVWPYQ KPEITSEIYR DSNFEKYFIQ QISGTSRIRT LAKLAALLHD IAKPQTRSTD PDGRVRFTGH PLEGSRITSE ILTRLRFSKK EISLVEKMVC YHLRPVQMNP DGQLPSSKAI YRYFRDLSEA ATATLYLSLA DHLATDGPNL MVANWQEHVN IVAHILSEQK RQLTRLTPKR LITGTDLIER FALRPGPRIK ILLGEIAEAQ AAGEIKTRRE AFKFISQRLG GKPENNLN
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