Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0285 |
Symbol | |
ID | 5132085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 296763 |
End bp | 297491 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640529185 |
Product | putative ATP binding protein |
Protein accession | YP_001213750 |
Protein GI | 147668932 |
COG category | [R] General function prediction only |
COG ID | [COG2102] Predicted ATPases of PP-loop superfamily |
TIGRFAM ID | [TIGR00290] MJ0570-related uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATG TGTTTATATC GTGGAGCGGA GGCAAGGATT GTTGTCTTTC TGCTTACAGA GCAATCCGTG ATGGACATAA TATCCGCTAT CTGGCAAGTA TAATTACCAA TAACACCGGC CGCCTCTGGC CGCATTTACT TACCCCGGAA GTTCTCAATA TGCAGGCACA GGCTATGGGC ATACCCCTTT TGGAGTGGGA TACAGATATC TCAAACTACA ATTCGGAGTA CATAAAAATG CTCCAGTACC TTAAGGGAAA GGGTGTGAAC CATGGCGTTT TCGGGGATGT CAGTATTGGT AATGCCCAAG CAAATGAACA TAAGTCATGG ATAGACAGCG TTTGTGTCCC CAATGGCATA GTCAGTCATC TGCCGCTTTG GGATGAAACC CGAGAATCTC TTTGGCGTGA TCTGCTGGAA TCAGGTTTTG AAGCCATTAT CATAGCTGTA GATAACGACA AACTCGGCAA AGATTATCTA GGACAAAGAC TAGACAAGAA TCTTCTTTCA GAACTAAAAG TCCGTCATCA GCTCTCCCCA ACCGGAGAAG TGGGTTACTA CCATACCTTT GTGGTTGACG GGCCTATTTT CAGTCATAGA TTAAAACTGG TTAAAGCTGA GCCAATTCAA TACGCCGTAC CAAAAGATGT TTGGTATCTG GATATTCAGG AATGTAAGCT GGAAAAAAAA GAATCCTATT CTCCATCTTT GAAGATATCT CAATACTAA
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Protein sequence | MADVFISWSG GKDCCLSAYR AIRDGHNIRY LASIITNNTG RLWPHLLTPE VLNMQAQAMG IPLLEWDTDI SNYNSEYIKM LQYLKGKGVN HGVFGDVSIG NAQANEHKSW IDSVCVPNGI VSHLPLWDET RESLWRDLLE SGFEAIIIAV DNDKLGKDYL GQRLDKNLLS ELKVRHQLSP TGEVGYYHTF VVDGPIFSHR LKLVKAEPIQ YAVPKDVWYL DIQECKLEKK ESYSPSLKIS QY
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