Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0251 |
Symbol | |
ID | 5132030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 257974 |
End bp | 258516 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529152 |
Product | DJ-1 family protein |
Protein accession | YP_001213717 |
Protein GI | 147668899 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01383] DJ-1 family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGTT TTGCCGTTTT GTTAGCCGAG GGTTTTGAAG AAATAGAATT CTGCACTATT ACGGATATTC TCCGGCGCGC AGACCTTGAG GTCAAGATAG TAGGACTTAA AAACGACCTT ACCGGCGGCT CAAGGGGAAT CCGTATAATG CCGGATATAC ATATAGATGA CCTGAAGACC ACTGATTACG AAGTGCTGGT TCTGCCCGGC GGCAATCCGG GCTTTATAAA TATGGGCAAA GACCAGAGGG TACTTGAACT TATCCGCACC GCCCATGCCG AAAACAAATA CCTGGCGGCT ATTTGTGCCG GGCCGGCAGT ACTCTCCAGA GCCGGAGTGA TAGACGGCAA AGAGGTTGCC ATATATCCGG GGGTTAAGCA CCTTTTGAAA AATTGCACCG CCTGTGACCT GCGGGTAAAG GTAGAGGGCA GGCTGATTAC CGGGCGAAGC CCTCAGGCCG CCATGGATTT TGCCCTGACC CTGATGGATA TGTTTGCCAA ACCACAATCA GCCAAAGTAG TGCGGGATGA AATGCTGGTT TAA
|
Protein sequence | MSRFAVLLAE GFEEIEFCTI TDILRRADLE VKIVGLKNDL TGGSRGIRIM PDIHIDDLKT TDYEVLVLPG GNPGFINMGK DQRVLELIRT AHAENKYLAA ICAGPAVLSR AGVIDGKEVA IYPGVKHLLK NCTACDLRVK VEGRLITGRS PQAAMDFALT LMDMFAKPQS AKVVRDEMLV
|
| |