| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0159 |
|---|
| Symbol | |
|---|
| ID | 5132037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 157300 |
|---|
| End bp | 159741 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640529062 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001213628 |
|---|
| Protein GI | 147668810 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA AATATAATCC GCAGGAAACA GAAAAAAAAT GGCAGGATAA ATGGGCGGCA
GACCGCCTTT ACCACGCCAG TGAAGACAGC CCCAAACCCA AATGGTACTC CCTTACCATG
TTCCCTTATA CCTCGGGCAA TCTCCACATA GGCCACTGGT ATGCCGAAGT TCCGGCGGAC
TGTTTTGCCA GATACAAACG CCTGAGAGGC TTTAATGTAA TGCGCCCGGT GGGTTTTGAC
TCTTTCGGCC TGCCGGCTGA AAATGCCGCT ATCAAGCACA ATATCCACCC CCGTATCTGG
ACCCTGAATA ACGTAGAAAA CATGCGCCGC CAGCTGAAGA CAATAGGTGC TATGTTTGAC
TGGGACAGGG AGGTTATAAC CTGCCTGCCC GAATATTACA AGTGGACACA ATGGTTCTTT
TTAAAGCTGT ACGAAGCCGG ATTGGCCTAC CGTGCCAAAG CCCCGGTAAA CTGGTGCCCC
AGTTGCCAGG CGGTATTGGC CAACGAACAG GTGGTAGACG GCACTTGCTG GAGGTGCGAA
ACCCCCACCA CCCGGCGCGA CCTTGAGCAG TGGTTTTTCC GCATCACCAA CTATGCAGAC
GAACTCAAAG ACCACGAAGG GTTGGACTGG CCGGAAAAAA TAACCGCCAT GCAGAGAAAC
TGGGTAGGCA AAAGCTACGG AGCGGAAGTG TCATTCGCCC TTGACTGCCC AACTGCTTTT
GAAAAAGAGA TAAAAGTCTT TACCACCCGC CCGGACACTA TCTACGGGGT TACCTTTATG
GTGCTGGCAC CCGAACACCC GCTGGTTGAA AAGATAACCA CCCCCGAAAA CAAAGCGGCG
GTGGATGCCT ATATAAAGAA GTCCCGTACC TGCACCGAGA TTGAACGCCT TTCCACCGAA
AGGGAAAAAG ACGGGGTATT TACCGGTACA TATGTAACCA ACCGGGTCAA CGGGCAGAAA
GTACCCGTCT GGATAGGTGA TTACGTACTC CAGAGCTACG GTACCGGGGC GGTTATGGGC
GTACCCGCCC ATGACGAACG GGATTTCGTT TTTGCCCAAA AATACCATTT GCCGGTTATA
ACAGTCATCG CCCCATCCGC ATATGACGGC AAACCCCTTG AGGCGGCCTA TATAAACGAA
GGAGTTATGT TAAACTCCGG CCCTTTTAAC GGTACACCGA ATACCGAAGG CAAGGAAAAG
GTATGTGACT ATCTGGCCGA ACACGGCTGG GGCAAGAAAA CCGTAAACTA CAAACTGCGT
GACTGGCTTA TTTCCCGCCA GCGTTACTGG GGCGCCCCCA TACCCATGGT CTACTGCGAA
AAATGCGGCA TTGTGCCCGT ACCTGAAAAA GACCTGCCGG TACTCCTGCC AGAAGATGTT
GGATTCCGCA GCGGAGGGGA ATCCCCCTTA AAATACAACG AAGGCTTTGT AAATACCATC
TGCCCGGTCT GCGGAGGAAA AGCCAAACGC GAAACAGATA CCATGGATAC TTTCATGTGT
TCTTCGTGGT ATTTCCTGCG TTACACCAGC CCCGGTTATG ACAAAGGACC GTTTGACCCG
GTAAAACTCA AATACTGGAT GCCGGTAGAC CTTTATACCG GCGGTGCCGA ACATGCGGTT
ATGCACCTTT TCTATTCCCG TTTCTTCACC AAAGCCCTGC GGGATATGGG CATAATAGAC
TTTGGCGAAC CCTTTAAAAA GCTCTTTAAC CAAGGCATTA TTGTCAGCAA CCACCAGAAA
ATGAGCAAAT CCAAGGGCAA CGTGGTTACC CCGGATAATC TGGTGGCGGA AGTAGGCACA
GACGCCGTCA GGGCTTACCT GATGTTTGTG GGTCCGTGGG ATCAGGGCGG CGAATGGAAT
GATTCCGGCC TTTCGGGCAT GAGCCGCTGG CTGAACCGGG TCTGGAATTT GTTTACCGAG
GAATATACTC CCCAAACCGC CTCGGCTGAA GCGGAACGCG AACTTAAGCG CACCCTGCAC
CAGACTATCA AGAAGATAAC CATGGATATT GAACGGCTGC GTTTCAATAC CGTGGTAGCC
GCCCTTATGG AGCTTTCAAA CAGTCTGGCA AAGCTAAAGG AAACGGCGGC TATTTCGGCA
GAAAACTGGC AAAACACACT TCAAACTTTT GCACTTATGC TTGCTCCGGT TGCCCCCCAT
ATTGCCGAGG AACTCTGGGC TAATCTGGGC ATGAAGTATT CAATCCACAA CCAGAACTGG
CCGACGTGGG ACGAAGAACT GGCCAAGGAC GAAGTTATAA CTCTGATTAT TCAGGTAAAT
GGCAAGCTCC GCGAAAGGCT GGAAATGCCG GCCGGAATTT CAGAGGCCGA AGCCAAGGAA
ACGGCTTTAA ACAGCGAAAG GGTCAAACCC CACCTGCTGG GCAAAACCCC CGTAACTGTT
ATATACGTAC CCGGCAAATT AGTAAATATT GTGGTGAAAT AA
|
|---|
| Protein sequence | MAEKYNPQET EKKWQDKWAA DRLYHASEDS PKPKWYSLTM FPYTSGNLHI GHWYAEVPAD
CFARYKRLRG FNVMRPVGFD SFGLPAENAA IKHNIHPRIW TLNNVENMRR QLKTIGAMFD
WDREVITCLP EYYKWTQWFF LKLYEAGLAY RAKAPVNWCP SCQAVLANEQ VVDGTCWRCE
TPTTRRDLEQ WFFRITNYAD ELKDHEGLDW PEKITAMQRN WVGKSYGAEV SFALDCPTAF
EKEIKVFTTR PDTIYGVTFM VLAPEHPLVE KITTPENKAA VDAYIKKSRT CTEIERLSTE
REKDGVFTGT YVTNRVNGQK VPVWIGDYVL QSYGTGAVMG VPAHDERDFV FAQKYHLPVI
TVIAPSAYDG KPLEAAYINE GVMLNSGPFN GTPNTEGKEK VCDYLAEHGW GKKTVNYKLR
DWLISRQRYW GAPIPMVYCE KCGIVPVPEK DLPVLLPEDV GFRSGGESPL KYNEGFVNTI
CPVCGGKAKR ETDTMDTFMC SSWYFLRYTS PGYDKGPFDP VKLKYWMPVD LYTGGAEHAV
MHLFYSRFFT KALRDMGIID FGEPFKKLFN QGIIVSNHQK MSKSKGNVVT PDNLVAEVGT
DAVRAYLMFV GPWDQGGEWN DSGLSGMSRW LNRVWNLFTE EYTPQTASAE AERELKRTLH
QTIKKITMDI ERLRFNTVVA ALMELSNSLA KLKETAAISA ENWQNTLQTF ALMLAPVAPH
IAEELWANLG MKYSIHNQNW PTWDEELAKD EVITLIIQVN GKLRERLEMP AGISEAEAKE
TALNSERVKP HLLGKTPVTV IYVPGKLVNI VVK
|
|---|
| |