Gene DehaBAV1_0130 details

Gene Information

• Locus tag: DehaBAV1_0130
• ID: 5131500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 126795
• End bp: 128852
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640529033
• Product: ABC transporter related
• Protein accession: YP_001213599
• Protein GI: 147668781
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.906602
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTTATA CCTCCTTTGG CGGCGGGGGT TTCTTACTGT ATAATGGCTA CTATACAAAA 
ACTAATATGT TAAATATCCA AAATCTTTCC AAATCCTTCG GGGTGCGCAG CCTTTATACC 
GGCGTAAACC TGAATATAGG CGCAAGAGAC CGCCTGGCTT TACTTGGCCC GAACGGCAGC 
GGTAAAACTA CCCTTTTTGA AATGATTGCC GGCAGGCTGG AACCTGATGA AGGTAAAATC 
ATCCTCCGCC GCGGCACTAC GGTAGGTTAT CTGGAGCAGG ATATCAAACC CAGTTCCAAA 
CAACCCCTGC TTAAAGCTGT TTCCAGCGCC TCAGACCGCC TCCGTTCCCT TTCGCACAAG 
ATTTCCCTGC TGCAGGGAGA ACTGGCAGAA GAAAAAGACG GCTCTGAAAG CAACCGCCTG 
ATGAACGAAC TGGGTGAACT TCAGCACTCT TTTGAAGCTC TGGGCGGCTA TAACGCCGAA 
CAGGAAGCTA AACTGATACT GGCAGGACTG GGTTTCAAAC CCGCCGATTT TGACCGCCCC 
CTGCATGAAT TTTCCGGCGG CTGGCTGATG CGGGCTGAAC TGGCAAAACT CCTTTTCCTC 
AGCCCGGATA TACTTATACT GGACGAACCT ACCAACCACC TTGACCTGGA ATCCACCCGC 
TGGTTTGAAA GCTACTTGAA GCAGTACAGT GGTTCGGTGC TTTTTACCAG CCATGACCGG 
GCATTTTTAA ACTCCATCGC AACCAAAATA CTGTCACTGG AGGAACAAAA AGCCCGTCTC 
TATACAGGCA ATTATGACAG CTACCTGCGT GAGCGCGAAC TCCGCCTAAT CCAGCTTGAA 
AGCCAATCCC GCCGCCAGCA GGAGCTTATA GACAAAGAAA CCAAGTTTAT AGAACGTTTC 
CGTTACAAAG CCACCAAAGC CAGCCAGGTG CAAAGCCGGA TAAAAAAGCT GGATAAACTG 
TCTGCCATAG TTATCCCCCG CCAGACCAAG AAAATGCACT TCAACTTCCC TGAACCGGAA 
CGCAGCGGGC ATGATGTTAT AAAACTAAGA AACCTTACCA AGTCTTACGG CGATATGGTT 
ATCTACCAGG GGCTGGAACT GGTACTCAAC CGCGGAGACA AAGTTGCACT GGTAGGTCCG 
AACGGTGCCG GCAAAACCAC CCTCCTGAAG ATACTGGCCG GGGTTATGCT CTTTGATTCG 
GGTTACCGTA ATCTGGGTGT AAACGTAAAT ACCGCCTATT TCGCTCAGTA TTATGTAGAG 
TCACTCTGCC CGTCCAATAA CCTTATTCAG GAACTGGAAA CAATACTGCC TGATGCCCCT 
GAACAGCAGC TGCGGGGCAT GCTGGGGGCA TTTCTATTCA GCGGAGATGA TGTAAAAAAG 
AGAATATCGG TACTGTCGGG TGGTGAAAAA ACCCGTTTGG CTATCGCCAA AATGCTACTC 
AAACCAGCCA ATCTGGTACT CATGGACGAG CCTACCAACC ATCTGGATAT ACCTGCCCGT 
GAAATACTGG CTGATGCCCT TCAGGCTTAC AAAGGCACTC TTTGTTTCAT CACTCATGAC 
CGCACCCTTA TCCGCGAAGT GGCCACCAAG ATTATTGAAG TACGAAACGG TAAAATCAGA 
ATTTTTGAAG GCGATTATGA TGCCTATCTG GAATTTGCCG CCGCCAACCC CTTTGAAGAT 
GAAATACTAA AGAACAGGAC TGCGGTCAGT TCCCCCCGCC CCGCTCCCGT TTCAGCCTCA 
CTCTCCCAGA AACAGCGTAA AACTCTGGAA GGTCAGATTA GAAACCAGCA TTATAAAGAA 
ACAGGGGCTT TAAAACAGGA AATCTCTGAT ACAGAGGAAG AAATAACCGG GCTGGAAAAA 
AGCAAACAGG AACTGGAAAC CCTGCTTGCC GACCCCGATT TATACCGAAG CGGCCAAAAA 
GTGGCCGATG CCTCTTTGGA ATATAAAACC TGCAAAGAAC GGCTGATAAT TCTGGGTGAA 
AAATGGCTGA AACTTTGCCA GCAGAATGAC ACACTTAAGC AGAAACTGGA AGATACCCTA 
AAGGAACTGG ATAACTAA 

 

Protein sequence

MSYTSFGGGG FLLYNGYYTK TNMLNIQNLS KSFGVRSLYT GVNLNIGARD RLALLGPNGS 
GKTTLFEMIA GRLEPDEGKI ILRRGTTVGY LEQDIKPSSK QPLLKAVSSA SDRLRSLSHK 
ISLLQGELAE EKDGSESNRL MNELGELQHS FEALGGYNAE QEAKLILAGL GFKPADFDRP 
LHEFSGGWLM RAELAKLLFL SPDILILDEP TNHLDLESTR WFESYLKQYS GSVLFTSHDR 
AFLNSIATKI LSLEEQKARL YTGNYDSYLR ERELRLIQLE SQSRRQQELI DKETKFIERF 
RYKATKASQV QSRIKKLDKL SAIVIPRQTK KMHFNFPEPE RSGHDVIKLR NLTKSYGDMV 
IYQGLELVLN RGDKVALVGP NGAGKTTLLK ILAGVMLFDS GYRNLGVNVN TAYFAQYYVE 
SLCPSNNLIQ ELETILPDAP EQQLRGMLGA FLFSGDDVKK RISVLSGGEK TRLAIAKMLL 
KPANLVLMDE PTNHLDIPAR EILADALQAY KGTLCFITHD RTLIREVATK IIEVRNGKIR 
IFEGDYDAYL EFAAANPFED EILKNRTAVS SPRPAPVSAS LSQKQRKTLE GQIRNQHYKE 
TGALKQEISD TEEEITGLEK SKQELETLLA DPDLYRSGQK VADASLEYKT CKERLIILGE 
KWLKLCQQND TLKQKLEDTL KELDN