| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0105 |
|---|
| Symbol | |
|---|
| ID | 5131584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 105240 |
|---|
| End bp | 106106 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640529008 |
|---|
| Product | putative ATP binding protein |
|---|
| Protein accession | YP_001213574 |
|---|
| Protein GI | 147668756 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2102] Predicted ATPases of PP-loop superfamily |
|---|
| TIGRFAM ID | [TIGR00290] MJ0570-related uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATT TTGACCTATC TCCTAGCAGA ACTGGAATAC TGGAAGATAA TACCCGATTT
TATGGAAACA GTGAAGCCAG TTTATCTCTC AAATCACCTA TTACGGAATA TAGCCTTTCC
CCAAATGCAA ATAACCTGAC AAATCTACCG TGGCAACCTG GTGCAGTTAA TCAGAGGGTT
TTAGTTTCTT GGAGCGGGGG CAAGGATTGT TGCTTATCCT GTTATCTGGC AATGCTGGCT
GGTCTGGATA TCCGCTGTCT GCTGAGCGTT ATTGACCATA CCGGGCGTTT GGGAGCACAT
AGCCTTGCTC CGCAAATACT TCATGCCCAA GCTGAAGCAA TTGGGATTCC TTTGGTTACA
AGACAGGTAC GGGTTTCTGA ATACGATGCA GACTACTGTC GCGTAGTAAA AGAATTAAAA
GAGCAGGAAG GCATAAGTGG CGGCGTTTTT GGGGATGTTA ATATCGGTAA TTCAGAAGCT
GAGCTCCACG AAACCTGGGT TAAGCGTATA GGTAACTCTG CGGGCATACA AGCCCATCTG
CCTCTCTGGA ATATCAACCG CGAAAATATC CTCAGAATGC TTATAAGCTA TGGCTTTGAA
GTTTTGATGA TAGTGACCGA TAACTCTGAA TTAGGAAAAG AATGGCTGGG CAGACGTATA
GATATGGAAA CTTTAGCTGA ATTGAAAAGC AGATATGAAT CATCTGAAAA CGGGCGGGTT
GGTTATTATC ATACCCTTGT TGTAGACGGG CCAATTTTTC AGAAGAAACT TCAGATTGAA
AAAACTTCGA GAATATTCAA GGAAGATGAG TGGGGTGCTA ACTGGTATCT GGATATAGAA
AAGTGTTCGT TAAGCTCCAA GCATTAA
|
|---|
| Protein sequence | MNNFDLSPSR TGILEDNTRF YGNSEASLSL KSPITEYSLS PNANNLTNLP WQPGAVNQRV
LVSWSGGKDC CLSCYLAMLA GLDIRCLLSV IDHTGRLGAH SLAPQILHAQ AEAIGIPLVT
RQVRVSEYDA DYCRVVKELK EQEGISGGVF GDVNIGNSEA ELHETWVKRI GNSAGIQAHL
PLWNINRENI LRMLISYGFE VLMIVTDNSE LGKEWLGRRI DMETLAELKS RYESSENGRV
GYYHTLVVDG PIFQKKLQIE KTSRIFKEDE WGANWYLDIE KCSLSSKH
|
|---|
| |