Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0097 |
Symbol | |
ID | 5131633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 98940 |
End bp | 99575 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640529000 |
Product | resolvase domain-containing protein |
Protein accession | YP_001213566 |
Protein GI | 147668748 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.371309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTGG CACTGTATGC TAGGGTATCA TCAGAAGCCC AAGATGTAGA GCTGTCAATT GCTGCCCAGC TAAGGGCGTT AAGGGATTAT GCAGCTAAAA ATGAGCAGCA GATTGTTTAT GAGTTTATAG ATGAAGCTGA AAGCGGCCGT ACTGCCTCCC GTCCTGAATT CAAGAAAATG ATTGCTCTGG CTAAATCCAA TACTTCACCG TTTGAGGCCA TATTAGTCTG GAAATACTCA AGGTTTGCCC GCAACAGGGT TGACTCGATT ACCTACAAAA CACTCCTTCA GAAAAAGGGT ATCAAGGTTA TTTCTATAAA TGAACCGCTT GACGATACCC CTACCGGGAA ATTAATGGAA GGAATTATAG AAAGCCTGGA TGAATTCTAT TCGGCTAATC TGGGTCAGGA TATCAAGCGT GGTATGAAAG AAAACGCCCT AAGGGGATTC TTTAACGGCA GTCAGCCACC GTTGGGTTAC CGGATTATCA AGGTCAAAGA TGGGCCTAAA CAGCGTAACC GGCTTGAACC CGAATCTGAT ACATCCTCAG GGATAAAAAC GGTCAGGCAC ATTTTCAGTT TGGCGGATAA AGGCCAAGGA TGCAAAGAAA TTGCTGTTAC TCTTAACCGC GAGTGA
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Protein sequence | MKVALYARVS SEAQDVELSI AAQLRALRDY AAKNEQQIVY EFIDEAESGR TASRPEFKKM IALAKSNTSP FEAILVWKYS RFARNRVDSI TYKTLLQKKG IKVISINEPL DDTPTGKLME GIIESLDEFY SANLGQDIKR GMKENALRGF FNGSQPPLGY RIIKVKDGPK QRNRLEPESD TSSGIKTVRH IFSLADKGQG CKEIAVTLNR E
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