Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0083 |
Symbol | |
ID | 5131177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 86347 |
End bp | 87135 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640528986 |
Product | integrase catalytic subunit |
Protein accession | YP_001213552 |
Protein GI | 147668734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTAA TAGACCGCCA ATATCTGGCG ACGCCGTTCT ACGGGGCACG CAAGATAGCC TTGGAGTTAA AGAAACAAGC AGGTCTCACG GTCAACCGGA AACGTGTCCG ACGATTGATG CAGCTCATGG GTATCCGGGC CATCTACCGT CGCCCCAGGA CCAGTACTCC GGCAACCGGG CATAAGGTCT ATCCGTATCT GCTGCGCGAG CTGGAAATAA CCCGGCCCAA TCAAGTGTGG GCGGCGGATA TAACGTATAT CCCGATGTCA CGGGGTTTCC TCTATCTGGT GGCGATAATT GACTGGTACA GCCGATATGT CATTTCCTGG CGGCTGTCCA ATACGCTGGA TGCAGACTTC TGTGTCGCTG CTTTAGAAGA GGCTCTGAGT AAGGGTACGC CTGAAATATT CAACACCGAT CAAGGCAGTC AGTTCACCAG TGAAGCCTTT ACCGCTTTAC TGAAAGAGCA CAACGTCGGA ATCAGCATGG ATGGCAAGGG CAGCTATAAC GATAACTTGT TCATTGAGCG GTTATGGCGA ACAGTAAAAT ACGAGGAGGT GTATCTGAAA GCCTATCAGG ACGGTCGTGA GGCTAGAATC AGTCTGTGTA AGTATTTCCG CTTCTATAAC ACCAATCGTA TCCACCAGTC GCTGGGATAC CTGACACCGG TGGAAGTGTA TGCTGGTGCT ATGGATAAGA CTTGTAACGA CGTGGTAAAA TCATCAATAA CTAAACCCGC AGGAATGGCA GAACTCTCTC TTAATAAGGT CCCTATTCTG TCCTACTGA
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Protein sequence | MKLIDRQYLA TPFYGARKIA LELKKQAGLT VNRKRVRRLM QLMGIRAIYR RPRTSTPATG HKVYPYLLRE LEITRPNQVW AADITYIPMS RGFLYLVAII DWYSRYVISW RLSNTLDADF CVAALEEALS KGTPEIFNTD QGSQFTSEAF TALLKEHNVG ISMDGKGSYN DNLFIERLWR TVKYEEVYLK AYQDGREARI SLCKYFRFYN TNRIHQSLGY LTPVEVYAGA MDKTCNDVVK SSITKPAGMA ELSLNKVPIL SY
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