Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0052 |
Symbol | |
ID | 5131818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 53418 |
End bp | 54812 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640528955 |
Product | DNA repair protein RadA |
Protein accession | YP_001213522 |
Protein GI | 147668704 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.980062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA GCCGTAATGT TTATATCTGT TCCAACTGCG GACATGAGAG CCTGAAGTGG CTGGGGCGTT GCCCCGGCTG TCAGGAATGG AATACTCTTG AAGAAACAAC AATTGCTGCA CCTCTCGGGC GTAAAAATGC ACCTGCCCGG GTTATCAGCC CGGCAGCCGA GCTTTCCAGT CTGAATGCAT CAGATACTAC CCGCCGGAGT CTATCTATTT CAGAGTTCAA CCGGGTTTTG GGCGGTGGAA TAGTACCGGG TTCACTGATG CTTTTAGGTG GTGAACCGGG TATCGGCAAA TCCACGCTCC TTCTTCAGGT GGCTGCCTCG GTAGCCCAGA GCGGCGGCAA AGTGGTATAT GTTTCCGGGG AAGAGAACCC CGCCCAGATA AAAATGCGCG CTCAGCGTCT GGGTATCAGC GGCGAGGGGC TTTTCCTTAT GGCTGAGACA GACCTTAATG CCATTCTAGC CCAGCTTTCA GTCCTCTGCC CGTCATTGGT TGTTATAGAC TCTATCCAGA CTGTATTCTT GCCTGAGCTT GAGGCCGCAC CCGGTGCTAT AAATCAGGTG CGTGAATCAG CCCTCCGCCT GATGCAGTGG GCTAAGAGCA GCGGTGCCAG CGTATTTATC ACCGCCCATG TTACCAAAGA GGGCAACATC GCCGGGCCGC GCATACTGGA ACACATAGTA GATGTGGTCA TGTACTTTGA GGGCGAGTCC CAGAGTGCTT ACCGTTTGAT ACGTTCGGTC AAAAACCGCT TCGGTTCTAC CAACGAAGTA GGCATATTTG AAATGAAAAG TGAAGGATTG GTGGAAGTAG CCAATCCCTC GCAGATATTT TTATCTAATC GGCAGGCAAA CACTGTTGGT TCAGCTGTAA CAGCAGTGCT GGAGGGTAGC CGCCCTTTAC TGGTAGAGGT GCAGGCACTC ACCAATACCA CCAGTTTCGG CCAGCCGCGC CGCACGGCCA ACGGGGTAGA TTTTAACCGT ACTATTATGA TAGCCGCTGT TCTTTCCAAA CGCCTTTCCA TGCGGCTGGG TACCCAGGAC ATAATAGTAA ATGCCACCGG CGGTATTCGT CTGGACGAGC CGGCCGCAGA TTTGGCTATT GCTTTGGCCA TTGCCTCCAG TTACCGTGAT ATCGGGGTCT GCCCGGAAAC CATAGCACTG GGTGAGATTG GCCTTTCAGG GGAACTGAGG ACAATCCCTC ATTTGGAAAG ACGTCTTTCC GAGGCCAGCC GTTTGGGTTT TACGAGGGCT TTGGTACCTG CCGGTGCTAA TTGCCAGAAT ATAAATATAA ATGGTATCCA GATTATTGCG GTTTCAACTG TCAAAGAGGC TATTAAACTG GCGCTTACCG GGGTAAAAAC GGAGACCGAA GATGTTTTTG AATGA
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Protein sequence | MDKSRNVYIC SNCGHESLKW LGRCPGCQEW NTLEETTIAA PLGRKNAPAR VISPAAELSS LNASDTTRRS LSISEFNRVL GGGIVPGSLM LLGGEPGIGK STLLLQVAAS VAQSGGKVVY VSGEENPAQI KMRAQRLGIS GEGLFLMAET DLNAILAQLS VLCPSLVVID SIQTVFLPEL EAAPGAINQV RESALRLMQW AKSSGASVFI TAHVTKEGNI AGPRILEHIV DVVMYFEGES QSAYRLIRSV KNRFGSTNEV GIFEMKSEGL VEVANPSQIF LSNRQANTVG SAVTAVLEGS RPLLVEVQAL TNTTSFGQPR RTANGVDFNR TIMIAAVLSK RLSMRLGTQD IIVNATGGIR LDEPAADLAI ALAIASSYRD IGVCPETIAL GEIGLSGELR TIPHLERRLS EASRLGFTRA LVPAGANCQN ININGIQIIA VSTVKEAIKL ALTGVKTETE DVFE
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