Gene DehaBAV1_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0048 
Symbol 
ID5131866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand+ 
Start bp44047 
End bp44448 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID640528949 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001213518 
Protein GI147668700 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.112526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTGACA AGTGGATAGG GGCGGCTTTG AGCGACCCCT TAAGGATACT GGCTTCCCCT 
TTGGTTATAC TTCGGCGTGA CGATGATACC AAGACACTGG AAAATATTGA AAGTCTGGTC 
AAAACCCATC AGCCTGATCT GCTTATTATC GGTCTGCCTA TATCTCTAAA TGGTACTATC 
GGCCCGCAGG CGGAGAAGGT TAAAAGTTTC AGTGAACTAC TTTCAAGGCA TTTAAATATA 
GAAATTATTT ACCGGGATGA ACGCTTTTCT ACCGACGAAG CCCGCCGCAA AATGAATGAC 
AGCGGTAAGA ATAATAAAAC CGTCCGGGAT GATGCAGCAG CGGCAGCGGT TATTCTGCAG 
GACTATCTGG ACGAAACCAA TCCGCCTTGT TGCCAGCCTT AA
 
Protein sequence
MGDKWIGAAL SDPLRILASP LVILRRDDDT KTLENIESLV KTHQPDLLII GLPISLNGTI 
GPQAEKVKSF SELLSRHLNI EIIYRDERFS TDEARRKMND SGKNNKTVRD DAAAAAVILQ 
DYLDETNPPC CQP