Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0042 |
Symbol | |
ID | 5131853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 37091 |
End bp | 38194 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640528943 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_001213512 |
Protein GI | 147668694 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000318827 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAA CAATAGGTAT AATAGGTCTG GCTAAAAGCG GACGCACCAC CATTTTCAAC GCCGCTACCC GCAGTAACGC CGCCACCGGC TCTTATTCAC AGAGTAGTTC GGCCAACGTA GGCATTGTAA AGGTGCCTGA TGCCCGTTTG AGTCCCCTGG AAGAGATGTT CCACCCCAAG AAACTCACCC CGGCCGAAAT AAAATATTTT GACGTGGGGG CATCTCTCAA AGGCGGCACT AAAGACAGCT CGTTTTCAGG TGAACTTTTG ACCCAACTGC AAAACGTAGA TGCCCTGCTT AATGTTATCC GGGCATTTGA AGACACCGCC ATCCCTCTGC CTGCCGGCGG CATCAACGCC GAACGTGACC TGACCACCAT GAATGCCGAG CTTATTTTTT CAGACCTGAC TATTATTGAA AAAAGGCTTA ACCGCATCGG CAGCCAGATG AAGAGTGCCA AACCCCCGGA GAGAGCCGCT CTGGAACGTG AAAAAGAACT CATGGCCCGA ATCAAAGAAG CCATGGAGAA AGATATTCCC GTCCGTGATA TGGAAGTGGA TGAGGAAGAG GCCAAAATAC TGTCCGGTTA CCAGTTTCTG AGCAACAAAC CGGTGCTTAT GGTTATAAAC ATCGGCGAAG ATGACCTGCC CAAGGCCGCC GAGATGGAAG CCGAACTCAA TACCCGCTAC GGCGGCAAAA ACTACAGGGT GATTGTAATG TGCGGCAAAC TGGAAGCCGA ACTGATAAAT ATGGACGAGG CTGAAGCCAC CGAATTCCGC TCAAGTTACG GGCTTAAAGA AACCGGACTT GACCGCACCA TAAGAGCTTC CTATGACCTT TTAGACCTTA TCTCATTCTT TACCGTAGGG CCGGACGAAG TGCGGGCTTG GACTATTACC CGCGGTACTA TATCCCAGAA AGCAGCCGGC AAAATCCACT CCGATATAGA ACGGGGATAT ATACGGGCAG AAATTGTCCA CGTCGGTGAC CTGCTTACCG CCGGTTCACT GGCGGAAGTC AGAAAACGCG GTCAGCTGAG GCTGGAAGGC AAAACCTATA TAGTACAGGA CGGAGATACC GCCAACTTCC TGTTTAACGT CTAA
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Protein sequence | MAVTIGIIGL AKSGRTTIFN AATRSNAATG SYSQSSSANV GIVKVPDARL SPLEEMFHPK KLTPAEIKYF DVGASLKGGT KDSSFSGELL TQLQNVDALL NVIRAFEDTA IPLPAGGINA ERDLTTMNAE LIFSDLTIIE KRLNRIGSQM KSAKPPERAA LEREKELMAR IKEAMEKDIP VRDMEVDEEE AKILSGYQFL SNKPVLMVIN IGEDDLPKAA EMEAELNTRY GGKNYRVIVM CGKLEAELIN MDEAEATEFR SSYGLKETGL DRTIRASYDL LDLISFFTVG PDEVRAWTIT RGTISQKAAG KIHSDIERGY IRAEIVHVGD LLTAGSLAEV RKRGQLRLEG KTYIVQDGDT ANFLFNV
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