Gene DehaBAV1_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0024 
Symbol 
ID5132409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp23756 
End bp24256 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content49% 
IMG OID640528925 
ProductDNA uptake protein and related DNA-binding protein-like protein 
Protein accessionYP_001213494 
Protein GI147668676 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTT CCAAAAGGTT TGGTCTGCTG CTGGGACTTG CTCTTTCGGT CATAACCGCC 
CAAGGGTGTT CGGAAACTAC ACCACTTGCG GTATACACCC CTCCTCAAAT TACCGAAAAA 
CCACTTGAGA TATATATTTC AGGAAATATA AACTTGCCGG GTATTTATCC TGCCGGTACC 
CAAGACACTC TCCAGAGCCT GCTTGAATCC TCAGGCGGGT TAAAAGACAA CTCTGAACTG 
ACAACTATCT ACCTCAGTTT CAACCCGCCC CCATTAGCCT CTTCAGCCCA GAAAATAGAC 
CTGAACCGGG CGGAAATCTG GCTGCTGGTT GCCCTGCCCG GCATAGGTGA AGCACGGGCG 
AGCGACATTG TCAGCTATCG CAACCAGAAC GGGGGGTTTA AGAATACTCT GGAACTGATG 
CTGATACCCG GCTTCAGCCA GAGCCTGTAT GACCAGATAA AAGATATGAT ATGCGTTTCT 
GAAACGGCGG ATATATCTTG A
 
Protein sequence
MKVSKRFGLL LGLALSVITA QGCSETTPLA VYTPPQITEK PLEIYISGNI NLPGIYPAGT 
QDTLQSLLES SGGLKDNSEL TTIYLSFNPP PLASSAQKID LNRAEIWLLV ALPGIGEARA 
SDIVSYRNQN GGFKNTLELM LIPGFSQSLY DQIKDMICVS ETADIS