| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0012 |
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| Symbol | |
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| ID | 5131616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 13889 |
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| End bp | 14701 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640528913 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001213482 |
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| Protein GI | 147668664 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.50788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTT TAGAAAAACT AAAACAGGCC GGCAACAGAA ACAAAAGCCT GCTTTGCGTA
GGGCTGGACC CCGACCCGAA ACTTATGCCG GTGGGCATGA GCGCACTGGA ATTTAACCGC
GAAATTATAG AAGCCACCGC ACCTTTTGTC TGCGGATACA AAATAAATCT GGCCTTTTAC
GAAGCTTTGG GCAAACAGGG CTGGGAAATT TTATCTGAAA CCTGTGAGTT TATTCCCCGT
GAACTCATAA CCATAGCGGA TGCCAAAAGG GGAGATATAG GCAATACCTC AAAAGCCTAT
GCCAGAGCCA TATTAGACGA ACTGGATTGT GATGGCGTAA CTGTCAGCCC GTATCTGGGT
TATGACTCTC TTGAACCCTT TATTGAGTAT CAGGACAAGG GTATATTTAT CCTCTGCCTC
ACCTCCAATC AGGGCTCAAC AGATTTCCAG ATGCTGAAGA CCGAATATCT GGGGCAAAAA
CGCTTTCTGT ATGAAGTGGT GGCAGACAAG GCTTCCCTTT GGAACCGTTA TGAGAATATT
GGGCTGGTGG TGGGTGCTAC CCAGCAGGAA GAGCTTAAAA AACTCCGCCT CATCTACCCC
AAACTACCTT TTCTTATTCC GGGTATAGGC GCTCAGGGCG GAGACCTGAA GGCTACCATA
GAAAACGGGA CTAACCCCAA CGGTGAACTG GCTATTATAT GCGCTTCCCG CGGCATACTT
TACGCCCGTA GCGGCAGTGA ATTTGCCCAA GGGGCAGCCG AAGCCGCCGA ACAGATGCGG
GACGCCATAA ACCATTACCG AAAACGTTTT TAA
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| Protein sequence | MKFLEKLKQA GNRNKSLLCV GLDPDPKLMP VGMSALEFNR EIIEATAPFV CGYKINLAFY
EALGKQGWEI LSETCEFIPR ELITIADAKR GDIGNTSKAY ARAILDELDC DGVTVSPYLG
YDSLEPFIEY QDKGIFILCL TSNQGSTDFQ MLKTEYLGQK RFLYEVVADK ASLWNRYENI
GLVVGATQQE ELKKLRLIYP KLPFLIPGIG AQGGDLKATI ENGTNPNGEL AIICASRGIL
YARSGSEFAQ GAAEAAEQMR DAINHYRKRF
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