Gene DehaBAV1_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0008 
Symbol 
ID5131726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp10728 
End bp11330 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content53% 
IMG OID640528909 
Productmembrane protein 
Protein accessionYP_001213478 
Protein GI147668660 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGGGTT CTATCCCCTC AGCTTATCTG GTCACCCGCC GCCTTATCGG GCGGGACATA 
CGCCAGATGG GCGGGGGGAA TGTGGGGGGA TTAAATACCT TCCGTGAAGT AGGTACGGGG 
GCAGGCATCA GCGTAGCCTT TATAGATCTG GTTAAAGGCG CTCTGGCAGT TTCTGTTTCC 
TATTATCTGC TTACCCAAAA TGCCCAGTGG GTTATTCTGA CCGGTTTCAT GGCCGTAATC 
GGGCATAACT GGTCTGTCTG GCTGGATTTC AAAGGCGGCA AAGGGCTGGG GCCGGCATTC 
GGGGCAATGC TGTTCTTGCT GCCTGTTTAC GGTCTTCCCC AACAGCTGGG TATACTGGCA 
CTGCTGGTTT TTATACCTTT AGCCCTTACC CGAAATATAG CCCTAGCCAC CGGGATTGCC 
CTTTTCAGCC TGCCCTTTTT AGTCTGGTAC GGCAGCCATT CCGAATTTGC CACCCTGATA 
TCAGTTTTGC TCTTTTTAAT GATAGGGGGC AAGTTCGTAC TGGACAACAG GAAAAGCCTG 
CGTGACCCGG CTAACCGACG CAACCTGATA GTTGACCACT GGAAACGGCC GGATAAGGGC 
TAA
 
Protein sequence
MLGSIPSAYL VTRRLIGRDI RQMGGGNVGG LNTFREVGTG AGISVAFIDL VKGALAVSVS 
YYLLTQNAQW VILTGFMAVI GHNWSVWLDF KGGKGLGPAF GAMLFLLPVY GLPQQLGILA 
LLVFIPLALT RNIALATGIA LFSLPFLVWY GSHSEFATLI SVLLFLMIGG KFVLDNRKSL 
RDPANRRNLI VDHWKRPDKG