| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0002 |
|---|
| Symbol | obgE |
|---|
| ID | 5131201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1910 |
|---|
| End bp | 3184 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640528903 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_001213472 |
|---|
| Protein GI | 147668654 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACA GAGTAGAAAT TAATATCAAG GCTGGAGACG GCGGTAGTGG CAAGGTGAGC
TTCAGGCGTG AAAAATTCGT TCCTTACGGC GGGCCTGACG GGGGCGACGG CGGAGACGGC
GGCAACGTAT ATCTGGAAGC TGATTCCGGG CTTTACAGCC TTTTAAATTT TAAGCATAAA
AGAGTTCATA AAGCCTCTAA CGGTGAAGGC GGTATGGGCA GCCGTTGCAC TGGCCACAAC
GGGGCAGACC TGGTGATAAA AGTGCCGGTT GGTACGGTGG CTACTATTCT GGAGGAAAAC
GGCCAGAAAA GGGTTCTGGC TGATTTGGCG GCCGACGGAG ACCGCACCCT GGTAGCTCAC
GGGGGACAGG GAGGGTTGGG TAATACCCAT TTTGTTTCCT CTACCAATCA AGCCCCCATG
CTGGCTCAAA AAGGCCAGCC GGGCGGCGAA TATGACCTGA TACTGGAACT GAAACTTATT
GCCGATGTGG CTATTATCGG CTATCCGAAT GTGGGCAAGT CTTCACTGCT TTCCCTGCTG
ACAGCGGCTA AACCCAAAGT AGCCAACTAT CCTTTTACTA CTCTATCACC GGTAATGGGG
GTTATCGAAC GTCCGGAGGG TGTCTTTGTC ATGGCAGAAG TACCCGGACT TATTGAAAAT
GCCCATCTGG GCAAGGGTCT CGGGCACGAT TTCTTACGCC ATATTTCCCG CACCCGTATG
GTTATCCACC TGCTGGATGG CACTTCAGAA AACCCTATAG ACGATATGAT AAAGGTCAAC
AGCGAGCTGT ATCTTTACGA TGCCTCTTTG TCCGAACGCC CCCAGGTGGT AGCTATAAAC
AAGATAGATG ATGAGCTGGT ACAGCTCAGG CGGGAAGAAC TTAAGGAGAC TTTTAAAGAA
GCCGGGCTGG AGGTATTTTT TATTTCCGCC CTGACAGGCG AAGGGGTGGA TGTACTGCTG
GCTAAAGTAG CGGAAAAGCT GGACATTCTT AAAGCGGCGG ATATATCCGA AACAGCTCCC
GACCATGAAG TAAAGATTTT CCGGCCTGCC CCCAAGGGTA AAATGGGTTT TCGTATTACC
CGTTTGGAAG ATGGCTGGCA GGTGGAAGCC CCTGAGATTG AGCGGATTAT TGAGCACTCT
GATATTGAAG ACCCGGAGGT CAGGCGGCAG GTAATGGTGC TTTTGAAACA CCGCAGTGTC
CAGCAATCTT TGATAAAGTC CGGGGCAGTT ATCGGCCAAA AGATTATAAC CGGCAGGATG
GAATGGTATC TTTAA
|
|---|
| Protein sequence | MFDRVEINIK AGDGGSGKVS FRREKFVPYG GPDGGDGGDG GNVYLEADSG LYSLLNFKHK
RVHKASNGEG GMGSRCTGHN GADLVIKVPV GTVATILEEN GQKRVLADLA ADGDRTLVAH
GGQGGLGNTH FVSSTNQAPM LAQKGQPGGE YDLILELKLI ADVAIIGYPN VGKSSLLSLL
TAAKPKVANY PFTTLSPVMG VIERPEGVFV MAEVPGLIEN AHLGKGLGHD FLRHISRTRM
VIHLLDGTSE NPIDDMIKVN SELYLYDASL SERPQVVAIN KIDDELVQLR REELKETFKE
AGLEVFFISA LTGEGVDVLL AKVAEKLDIL KAADISETAP DHEVKIFRPA PKGKMGFRIT
RLEDGWQVEA PEIERIIEHS DIEDPEVRRQ VMVLLKHRSV QQSLIKSGAV IGQKIITGRM
EWYL
|
|---|
| |