| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4952 |
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| Symbol | |
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| ID | 5094222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 5984397 |
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| End bp | 5985275 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644744377 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001197270 |
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| Protein GI | 146302679 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.017601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAG CTAAAAATTT TTATAGAGAG ATCGCGCCGC TTTCTGCCGG AGATAGTTTT
TTGGTTTTTG ACAGAGTAAA AGACAGTTTT GATTTTCCGG TTCATTATCA TCCTGAATTT
GAGATTAATT TTATTTTAAA TGGAAAAGGA GTAAGGCGTG TTGTGGGTGA TAATATTGAG
GAAATTGATA ACGTCGAATT AGTTTTAATT GGTCCAAATT TATATCACGG CTGGGAACTG
AATAAGTGCA CAAATAAAAA AATACATGAA ATTACGATTC AGTTTCATAA TGATTTATTT
CATGAATCTT TGCTTGCACG ACGTATTATG AACCCAATTC GGGATATGTT TAATCGTTCG
ATTCACGGAA TTTTATTTTC TAAAAAAACA GCTGAAGAAT TGACGCCAAG GCTTGTGAGG
CTTTCTAAAC TGGATGGTAT TGATTATTTT TTAGAAATTA CTTCCTTATT ATATGATCTT
GCCAATTCAA GAAATCAAAG ACTGCTTTCT ACTTATACGG TAGATTATGA TAAGTTTGAT
GATTATGATA AAATGAAACT GGTATATGAA TATGTACAAA AACATTTTGC TGAAAAAATT
ACTTTAGAAG ATGTAGCGAA TGTTGCCAGT ATGTCGATTA TTTCTTTTAA CCGATTTATA
AAAAAGCGCA CCGGAAAAAC TTTTGTTAAT TATATAAATG ATATCAGAAT TGGATATGCT
GCGCGCTGGC TTGTAGAGAA AGATATGAGT GTTTCTGAAG TTGCATTTAA ATCCGGCTTT
AATAATATTG CGAACTTCAA TCGCAGTTTT AAGGCTATTA AAAATTGTAC ACCAAGCCAA
TACAGGGAAG ATTTTTCTGG ATTGAAGCGT ATATTATAA
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| Protein sequence | MSTAKNFYRE IAPLSAGDSF LVFDRVKDSF DFPVHYHPEF EINFILNGKG VRRVVGDNIE
EIDNVELVLI GPNLYHGWEL NKCTNKKIHE ITIQFHNDLF HESLLARRIM NPIRDMFNRS
IHGILFSKKT AEELTPRLVR LSKLDGIDYF LEITSLLYDL ANSRNQRLLS TYTVDYDKFD
DYDKMKLVYE YVQKHFAEKI TLEDVANVAS MSIISFNRFI KKRTGKTFVN YINDIRIGYA
ARWLVEKDMS VSEVAFKSGF NNIANFNRSF KAIKNCTPSQ YREDFSGLKR IL
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