Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4812 |
Symbol | |
ID | 5089440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5820361 |
End bp | 5822289 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644744235 |
Product | glucosamine-6-phosphate deaminase-like protein |
Protein accession | YP_001197130 |
Protein GI | 146302539 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.116561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA CTACTTCTTT GGCTTACGAT ATTCCGGGAA AATTTGAAGA AACACGATTT GAAAAAAATC ATAATGTAAT CTTTGAAAAC TCTGCCGAAG CTTCAAAAAA TGTCGCTCAA GAAATAGCTG AATTAATACG TTTAAAACAA ACTAACAACG AATCATGTGT ACTTGGCCTT GCAACAGGCT CTTCACCAAT TAAAGTATAC GAAGAACTGG TTCGAATGCA TAAAGAAGAA GGTCTTAGCT TTAGTAACGT AATTACTTTT AATTTGGATG AATATTATCC AATGAATAAA GAAAACCGTC AAAGCTATCA TTATTTCATG CATCAGCATC TTTTTAATCA TATTGATATT AAACCTGAAA ATGTAAATAT TCCCGACGGA ACAATTGCTT TAGAACAATT AAATCAATAC TGCATTGATT ATGAATTGAA AATTAAACAA GCAGGCGGAC TTGATTTTCA ATTGCTTGGA ATTGGGCGTA CAGGACACGT TGGTTTCAAT GAGCCTGGAT CACACATTAA TTCAGGAACC AGAATTATTA CTCTGGATCA TATTACAAGA GTAGATGCTT CATCTGACTT TAACGGAATT GACAACGTTC CAAAAAGAGC CATCACGATG GGAGTTTCTA CCATTATGAG ATCAAAAAGA ATTGTATTAA TGGCGTGGGG ACAAAACAAA GCGTCTATTA TAAAGAGAAC CATTCAGGGC GAAATAAGTT CTGATGTTCC TGCAACGTTT TTACAAAATC ATCCAAACGC TACTTTCGTT TTAGACCAAT CAGCAGCATC AGAATTGACA CGCTTTAAAA CACCTTGGCT GGTTGGAGAA TGTATCTGGA CAGAAGAATT AAAGAGCAAA GCAATCGTTT GGCTTTGTAA AAAAACAAAA CAATCTATTT TAAAACTGAC AGATCGTGAT TACAACAATA ACGGAATGTC TGATTTATTA GCACATGGCA GTTCTGCCTA CGATTTGAAT ATAAATATGT TCAATATTTT GCAGCATACT ATTACAGGCT GGCCGGGAGG AAAACCAAAC ACAGATGATT CACACCGTCC GGAAAGAGCC AATCCTGCCA AAAAACGAGT AATCCTGTTT AGTCCGCATC CAGATGATGA CGTGATTTCG ATGGGAGGAA CTTTTTCAAA ATTGATAAAA CAAGGCCACG ATGTACATGT TGTGTATCAA ACCTCCGGAA ATATTGCCGT TACAGATGAT GAGGCATTGA AATTTGCAGA AGTATGCAAC GATTTTGTTG GTGCAGATCT TCCAAAAGAC ATTAACTTCA AATCAGTGAT TGAATTTTTG AATAACAAAT CAGAAAATCA GATTGATTCT CTTGAAGTTC GAAAACTAAA AGGATTAATC AGAAGAAGAG AGTCTTACGC AGCAACAAGA TACATTGGAC TAAAAGATGA AAATACACAC TTTTTGGATC TTCCGTTTTA TGAAACCGGA CAGGTTAAAA AGAATCCGCT GGGTCAGGAA GACATCGAAA TTGTAAAAGA AATCATTGCC AGAATAAAAC CGCATCAGGT TTTTGCAGCA GGAGATTTGG CTGATCCGCA TGGAACACAT GAAGTATGTC TGAATGCGAT TTTTGCAGCC ATGAAAGAAT TGAAACCAGA AAAATACATG GACGACTGCT GGTTATGGTT ATACAGAGGT GCATGGCACG AATGGGATAT CCACGAAATT GATATGGCAG TGCCGCTTTC TCCATCTGAA GTATTGTTGA AACGCCACGC CATTTTGTAT CATCAATCTC AAAAAGACAG AGTAATGTTC CAGGGAAATG ATTCTAGAGA ATTCTGGGTT AGAGCCGAAG ACCGAAATAA AAATACTGCA ATTCTGTATG ATGAATTAGG ATTGGCAGAA TATGAAGCTA TTGAAGCTTT TAAACGTTTT GATTATTAG
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Protein sequence | MKTTTSLAYD IPGKFEETRF EKNHNVIFEN SAEASKNVAQ EIAELIRLKQ TNNESCVLGL ATGSSPIKVY EELVRMHKEE GLSFSNVITF NLDEYYPMNK ENRQSYHYFM HQHLFNHIDI KPENVNIPDG TIALEQLNQY CIDYELKIKQ AGGLDFQLLG IGRTGHVGFN EPGSHINSGT RIITLDHITR VDASSDFNGI DNVPKRAITM GVSTIMRSKR IVLMAWGQNK ASIIKRTIQG EISSDVPATF LQNHPNATFV LDQSAASELT RFKTPWLVGE CIWTEELKSK AIVWLCKKTK QSILKLTDRD YNNNGMSDLL AHGSSAYDLN INMFNILQHT ITGWPGGKPN TDDSHRPERA NPAKKRVILF SPHPDDDVIS MGGTFSKLIK QGHDVHVVYQ TSGNIAVTDD EALKFAEVCN DFVGADLPKD INFKSVIEFL NNKSENQIDS LEVRKLKGLI RRRESYAATR YIGLKDENTH FLDLPFYETG QVKKNPLGQE DIEIVKEIIA RIKPHQVFAA GDLADPHGTH EVCLNAIFAA MKELKPEKYM DDCWLWLYRG AWHEWDIHEI DMAVPLSPSE VLLKRHAILY HQSQKDRVMF QGNDSREFWV RAEDRNKNTA ILYDELGLAE YEAIEAFKRF DY
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