Gene Fjoh_4808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4808 
Symbol 
ID5089436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5811971 
End bp5814475 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content37% 
IMG OID644744231 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_001197126 
Protein GI146302535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3525] N-acetyl-beta-hexosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA GTGTATTGCT GATAGCCATT TTTCTGAGTT CTTTAAGTAC CATACAAGCA 
CAGAAACTAG ATATAATTCC TAAACCCGTA AAAGTTGAAC AAAATGAAGG CGTATTTATT
ATTCCGTCAT CAGTACAAAT TATTGTAGAC AAAAAAGCAG AAAAAAGTGC TGAATATATT
AAGAGTTCTT TTTCGAAATA CACAGGGATT AACGCAATCG TTTCTATTGG AAATAAACAC
AAAAAAAATA CCATAGCATT TTTGGTCGAT GAAAAAATGA ACCTTCCTAA TGATGGTTAT
AAATTGAATA TCAACAAAAA AGGAATTTTA GTAAAAGGGA AATCTGCAAA CGGAGTTTTA
AACGGTCTGC AGACTTTATT GCAAATTTCT TCTGCAAAAG ACATTAAAAA AGGAAATATC
CCATTTGTAA AAATAGAAGA TTATCCTCGT TTTGAATGGC GCGGTATGAT GCTCGACTGT
TCAAGACAGT TTTTTGATAA ACAAACCGTT AAAAATTATA TTGACTGGCT GGCGGCGCAC
AAAATGAATG TTTTTCACTG GCATTTAACC GATGATAACG GCTGGAGAAT TGAAATCAAA
TCGATGCCTG ATTTAACTTT AAAAGGTGCC TGGAGAGGTC CGGGAGAAGT TTTACTGCCA
TCTTATGGTT CAGGAGACAA ACGTTACGGA GGTTTTTATA CGCAGGAACA TATCAAAGAA
GTAGTGGCGT ATGCTGCTAA TCGCGGCATA TCAGTTATGC CCGAAATTGA AATTCCGGGG
CATTCGCGTG CCGTAACCGC TTCGTATCCG GAAGTGGGCT GTGCGATAAC ACAGGAACTT
AAAAGTGTTC AGGGTGAAGT AAAAAATGTT TGGTGTGTGG GTCGTGAAGA AAATTATGTT
CTTCTGGATT CAATCATTAG AGAAGTTTCG GGACTTTTTC CTTTTGAATA TATTCATGTT
GCCGGAGATG AAGTCAATCG TGCCAACTGG GAAAATTGCC CAAAATGTCA GGCTTTGATG
GTGAAAGAAG GTTTTACAGA TAGTTTTCAG CTTCAAAATT ATTTCTTTAG AAGAGTTCAA
AAAATTGTAG ATAAATACCA TAAAAAAACA GATGGCTGGA ACGAAATTTT AAAAGGTGGA
GAAATTGATC CAAATACTTT GATTTCTGCC TGGCAGGGAA TTAGTTACGG AATTGAATCG
GCAAAGAAAG GATACCAGAC TATTATGATG CCGGGGCAAT ATACGTATTT TGATATGGCA
CAGTCTGAAA CAGAACGCGG TCATCGCTGG GCGGCTATTA CAGATACGAA AAGAGCCTAT
TCATTTGAGC CAATTCCTAC TGATGATTTA ACACCAGAAC AGCAAAAAAA TATAATAGGT
GTTCAGGGCG CTTTGTGGAG CGAATATCTG GATCGTCCAG CCAGAATTAT GGAATACCAA
AGTTATCCAA GAATCAGCGC TTTATCTGAA ATTGGCTGGT CTAAAAAAGA AGATAAAAAC
TGGGAAGATT TCTACGGAAG ATTAACACAC AGCCATTTAC AGCGTTTGGC TGATATGGGA
ATTGCTTTTA GGGATTTTCC GCCAGCCGCA ATTTATCAAA ATGGCACGAT TACCGTAACA
CCGCCTTACG AAGGTGCAGT TGTACGTTAT GATGCACAAG GTAATGAACC AACAAGACAA
TCGGCTTTGT ATACAAAACC AATTCAAACG AAGGATTATG AACATTATAT GTTCCGTACT
TTTTTTAATG AAGATGTGGC AAGTCCGTCG GTAAAAGTAG AAAAACTGCC TGTTGCGGTT
TGGAATACTT CAAAAGCAGA AGTTTTGAAT ATTTCTGAAA ATATTTCAGA GCATGTAGAC
AAAAATGGAA TTTGGTATTT AACTTTTACT CCTGATGCAG ATGCGAGTGC CAACGGAGTT
GTAAAAACAG TTTCTCTTTA TGAAAATGAT AAACTGATAC AGAGTTTTCC GGAAGAAAAA
ATGCTGAAAT CAAAACCTCG CCTGCGATTT GTAATTGAAA ATTACAATGA AAAAAATACG
TATCGTTTAG ACTTTACGGT AGAAAATAAA GAAGCAAAAG AATCAGCAGC AAAAGTAAAT
TTCAATTGTT CGCCTTATTT AGAGCCGGAA GTAAAAGTAA CATCATCGAT GGCTGAAAAT
CCTAAATTTC CGATTTCGAA TTTAGAAGAT TATAATGTTG AAACTTACTT GCGTACAGAT
ATTGCGTGTG CAAATGGCGA CTGGATTTTA TACACTTTTA CAAATCCTGT AACTTCTTCT
AAAATTGATG TGTTAACCGG AATTCCGCAT CACCCGAGGT TCATTGTCAA TAACGGTTAT
GTAGAATATT CGTATAACGG AATCGATTTT ATAAAAGGAG ATGCTTTTGA TTATGGCAAT
GCATCGATTT ATCCAAAACA GCCTGTAAAA GCAGTAAAAA TTGTCATTAC AGGAACCAAC
AACGAACCTC TTATGGCAGG ACAGGACATA AGAATTAATC CGTAG
 
Protein sequence
MKRSVLLIAI FLSSLSTIQA QKLDIIPKPV KVEQNEGVFI IPSSVQIIVD KKAEKSAEYI 
KSSFSKYTGI NAIVSIGNKH KKNTIAFLVD EKMNLPNDGY KLNINKKGIL VKGKSANGVL
NGLQTLLQIS SAKDIKKGNI PFVKIEDYPR FEWRGMMLDC SRQFFDKQTV KNYIDWLAAH
KMNVFHWHLT DDNGWRIEIK SMPDLTLKGA WRGPGEVLLP SYGSGDKRYG GFYTQEHIKE
VVAYAANRGI SVMPEIEIPG HSRAVTASYP EVGCAITQEL KSVQGEVKNV WCVGREENYV
LLDSIIREVS GLFPFEYIHV AGDEVNRANW ENCPKCQALM VKEGFTDSFQ LQNYFFRRVQ
KIVDKYHKKT DGWNEILKGG EIDPNTLISA WQGISYGIES AKKGYQTIMM PGQYTYFDMA
QSETERGHRW AAITDTKRAY SFEPIPTDDL TPEQQKNIIG VQGALWSEYL DRPARIMEYQ
SYPRISALSE IGWSKKEDKN WEDFYGRLTH SHLQRLADMG IAFRDFPPAA IYQNGTITVT
PPYEGAVVRY DAQGNEPTRQ SALYTKPIQT KDYEHYMFRT FFNEDVASPS VKVEKLPVAV
WNTSKAEVLN ISENISEHVD KNGIWYLTFT PDADASANGV VKTVSLYEND KLIQSFPEEK
MLKSKPRLRF VIENYNEKNT YRLDFTVENK EAKESAAKVN FNCSPYLEPE VKVTSSMAEN
PKFPISNLED YNVETYLRTD IACANGDWIL YTFTNPVTSS KIDVLTGIPH HPRFIVNNGY
VEYSYNGIDF IKGDAFDYGN ASIYPKQPVK AVKIVITGTN NEPLMAGQDI RINP