| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4184 |
|---|
| Symbol | |
|---|
| ID | 5093814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 5025277 |
|---|
| End bp | 5025915 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644743603 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001196511 |
|---|
| Protein GI | 146301920 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAA AATGTATTAT TTTCGATTGT GACGGAGTTT TGGTTGATAC TGAGAAAATT
GGCAACGGAA TACTGCTGGC AATGGCTCAG GAACACGGAT TCGAAATGGA ACTCGAAGAT
GCATACCGAT ATTTTAACGG TCGAAATTTA AAAGATTGTT TTCGTCATAT TGAAGAAGCA
ATTGACCAGA AACTGCCTGA AAATTTTGAA ACAGAATATC GCGAGAAAAG TTTTGAAGCT
TTTAAAACAC AGGTAAAACC TATGAAAGGC ATTGAAGATT TTATTGCAAA ATTAAAAATT
CCGTATTGTG TGGCATCAAG CGGACCTGTC GAAAAAATCC GTTTGAATCT TGAAGTGTCG
GGGTTGATCG ACAAATTCGA AAATAAAATA TTCAGTTCGT ATCAAATTGG CAGCTGGAAA
CCAGAACCGG GAATTTTTCT GCAGGCCGCT CAGCAAATGG GTTTTGAAGT AAAAGACTGT
ATTGTGATAG AAGACAGTAA AGCAGGAGTA AAGGCAGGTG TAAGCGGAGG TTTTAAAGTA
TACGGTTTTG TTAATGGTTT TAATAACGAA GATTTAGAAG AAGAAGGAGC CATTTTATTT
GACAGCTACG AAGAATTGAG TAAAATGCTG TCAATTTAA
|
|---|
| Protein sequence | MNVKCIIFDC DGVLVDTEKI GNGILLAMAQ EHGFEMELED AYRYFNGRNL KDCFRHIEEA
IDQKLPENFE TEYREKSFEA FKTQVKPMKG IEDFIAKLKI PYCVASSGPV EKIRLNLEVS
GLIDKFENKI FSSYQIGSWK PEPGIFLQAA QQMGFEVKDC IVIEDSKAGV KAGVSGGFKV
YGFVNGFNNE DLEEEGAILF DSYEELSKML SI
|
|---|
| |