Gene Fjoh_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4142 
Symbol 
ID5094051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4976654 
End bp4977385 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content34% 
IMG OID644743561 
Productalanine racemase domain-containing protein 
Protein accessionYP_001196469 
Protein GI146301878 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA ATATTATTTA TAATTTAAAG CAGGTTCACG ATCGTATCGA AAAAGCCTGT 
AAAGCTTCGG GAAGAGATAC AGCAGATGTT CAGTTATTGC TGGCAACCAA AACAGTTCCT
GCCGAAAGAA TACGAATTGC CATTGAAGCC GGAGAAAATT TAATTGGCGA AAATAAAATG
CAGGAATTTC GGGATAAGGA TTCAGAATTA AAAGATTTGA ATATCGAACG TCATTTCATT
GGTCATCTGC AGACAAATAA AGTAAAAGAT GTTTTGAAAT ATGTAAGCTG TATTCAATCT
CTTGACCGAT TAAGTCTGGC AGAAGAATTA CACAAACAGC TCCAGAAAGA AAACCGGGCT
ATTGCTGTTT TTGTTCAAGT TAATACCTCT TTTGAAGAAA GTAAATTCGG TCTTTCTCCA
ACAGAAGTAA TTCCGTTTAT TAAAGAAATC AGGAAATATG ATACTCTAAA AATCAAAGGA
TTAATGACAA TTGGTTTATT AGATGTCGAG AAAGAAAAAA TGCGTCCGTC GCTTCATCTG
CTTAAAGAAA TAAGAGATCA AATTTATGAG GCTGAAATTG AAGGTTTAAG CAATTTAAAA
CTTTCAATGG GAATGTCTCA GGATTTAGAA TTGGCTATTG CCGAAGGTTC TAATCTGGTA
AGAGTGGGAA CTTCTATTTT TGGAAACCGC TTTTTAGGCA AAGAAATCTG GAACGAAAAT
ATTGCAGAAT AA
 
Protein sequence
MKENIIYNLK QVHDRIEKAC KASGRDTADV QLLLATKTVP AERIRIAIEA GENLIGENKM 
QEFRDKDSEL KDLNIERHFI GHLQTNKVKD VLKYVSCIQS LDRLSLAEEL HKQLQKENRA
IAVFVQVNTS FEESKFGLSP TEVIPFIKEI RKYDTLKIKG LMTIGLLDVE KEKMRPSLHL
LKEIRDQIYE AEIEGLSNLK LSMGMSQDLE LAIAEGSNLV RVGTSIFGNR FLGKEIWNEN
IAE