Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4142 |
Symbol | |
ID | 5094051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4976654 |
End bp | 4977385 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644743561 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001196469 |
Protein GI | 146301878 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGA ATATTATTTA TAATTTAAAG CAGGTTCACG ATCGTATCGA AAAAGCCTGT AAAGCTTCGG GAAGAGATAC AGCAGATGTT CAGTTATTGC TGGCAACCAA AACAGTTCCT GCCGAAAGAA TACGAATTGC CATTGAAGCC GGAGAAAATT TAATTGGCGA AAATAAAATG CAGGAATTTC GGGATAAGGA TTCAGAATTA AAAGATTTGA ATATCGAACG TCATTTCATT GGTCATCTGC AGACAAATAA AGTAAAAGAT GTTTTGAAAT ATGTAAGCTG TATTCAATCT CTTGACCGAT TAAGTCTGGC AGAAGAATTA CACAAACAGC TCCAGAAAGA AAACCGGGCT ATTGCTGTTT TTGTTCAAGT TAATACCTCT TTTGAAGAAA GTAAATTCGG TCTTTCTCCA ACAGAAGTAA TTCCGTTTAT TAAAGAAATC AGGAAATATG ATACTCTAAA AATCAAAGGA TTAATGACAA TTGGTTTATT AGATGTCGAG AAAGAAAAAA TGCGTCCGTC GCTTCATCTG CTTAAAGAAA TAAGAGATCA AATTTATGAG GCTGAAATTG AAGGTTTAAG CAATTTAAAA CTTTCAATGG GAATGTCTCA GGATTTAGAA TTGGCTATTG CCGAAGGTTC TAATCTGGTA AGAGTGGGAA CTTCTATTTT TGGAAACCGC TTTTTAGGCA AAGAAATCTG GAACGAAAAT ATTGCAGAAT AA
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Protein sequence | MKENIIYNLK QVHDRIEKAC KASGRDTADV QLLLATKTVP AERIRIAIEA GENLIGENKM QEFRDKDSEL KDLNIERHFI GHLQTNKVKD VLKYVSCIQS LDRLSLAEEL HKQLQKENRA IAVFVQVNTS FEESKFGLSP TEVIPFIKEI RKYDTLKIKG LMTIGLLDVE KEKMRPSLHL LKEIRDQIYE AEIEGLSNLK LSMGMSQDLE LAIAEGSNLV RVGTSIFGNR FLGKEIWNEN IAE
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